benchmark_execution.cpp

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/* Author: Ioan Sucan, Mario Prats, Dave Coleman */

#include <moveit/benchmarks/benchmark_execution.h>
#include <moveit/benchmarks/benchmarks_utils.h>
#include <moveit/kinematic_constraints/utils.h>
#include <moveit/planning_scene/planning_scene.h>
#include <moveit/robot_state/conversions.h>

#include <boost/regex.hpp>
#include <boost/tokenizer.hpp>
#include <boost/lexical_cast.hpp>
#include <boost/program_options/parsers.hpp>
#include <boost/program_options/variables_map.hpp>
#include <boost/algorithm/string/case_conv.hpp>
#include <boost/algorithm/string.hpp>
#include <boost/math/constants/constants.hpp>
#include <boost/progress.hpp>
#include <boost/date_time/posix_time/posix_time.hpp>

#include <eigen_conversions/eigen_msg.h>
#include <Eigen/Core>
#include <Eigen/Geometry>

#include <fstream>

namespace moveit_benchmarks
{
namespace
{
// update the constrained link for Position and Orientation constraints, if that link is empty
void checkConstrainedLink(moveit_msgs::Constraints& c, const std::string& link_name)
{
  for (std::size_t i = 0; i < c.position_constraints.size(); ++i)
    if (c.position_constraints[i].link_name.empty())
      c.position_constraints[i].link_name = link_name;
  for (std::size_t i = 0; i < c.orientation_constraints.size(); ++i)
    if (c.orientation_constraints[i].link_name.empty())
      c.orientation_constraints[i].link_name = link_name;
}

void checkHeader(moveit_msgs::Constraints& c, const std::string& header_frame)
{
  for (std::size_t i = 0; i < c.position_constraints.size(); ++i)
    if (c.position_constraints[i].header.frame_id.empty())
    {
      c.position_constraints[i].header.frame_id = header_frame;
      c.position_constraints[i].header.stamp = ros::Time::now();
    }
  for (std::size_t i = 0; i < c.orientation_constraints.size(); ++i)
    if (c.orientation_constraints[i].header.frame_id.empty())
    {
      c.orientation_constraints[i].header.frame_id = header_frame;
      c.orientation_constraints[i].header.stamp = ros::Time::now();
    }
}
}
}

moveit_benchmarks::BenchmarkExecution::BenchmarkExecution(const planning_scene::PlanningScenePtr& scene,
                                                          warehouse_ros::DatabaseConnection::Ptr conn)
  : planning_scene_(scene), pss_(conn), psws_(conn), cs_(conn), tcs_(conn), rs_(conn)
{
  // load the pluginlib class loader
  try
  {
    planner_plugin_loader_.reset(new pluginlib::ClassLoader<planning_interface::PlannerManager>(
        "moveit_core", "planning_interface::PlannerManager"));
  }
  catch (pluginlib::PluginlibException& ex)
  {
    ROS_FATAL_STREAM("Exception while creating planning plugin loader " << ex.what());
  }

  // load the planning plugins
  const std::vector<std::string>& classes = planner_plugin_loader_->getDeclaredClasses();
  for (std::size_t i = 0; i < classes.size(); ++i)
  {
    ROS_INFO("Attempting to load and configure %s", classes[i].c_str());
    try
    {
      planning_interface::PlannerManagerPtr p = planner_plugin_loader_->createInstance(classes[i]);
      p->initialize(planning_scene_->getRobotModel(), "");
      planner_interfaces_[classes[i]] = p;
    }
    catch (pluginlib::PluginlibException& ex)
    {
      ROS_ERROR_STREAM("Exception while loading planner '" << classes[i] << "': " << ex.what());
    }
  }

  // error check
  if (planner_interfaces_.empty())
    ROS_ERROR("No planning plugins have been loaded. Nothing to do for the benchmarking service.");
  else
  {
    std::stringstream ss;
    for (std::map<std::string, planning_interface::PlannerManagerPtr>::const_iterator it = planner_interfaces_.begin();
         it != planner_interfaces_.end(); ++it)
      ss << it->first << " ";
    ROS_INFO("Available planner instances: %s", ss.str().c_str());
  }
}

void moveit_benchmarks::BenchmarkExecution::runAllBenchmarks(BenchmarkType type)
{
  moveit_warehouse::PlanningSceneWithMetadata pswm;
  moveit_warehouse::PlanningSceneWorldWithMetadata pswwm;
  bool world_only = false;

  // read the environment geometry
  if (!pss_.hasPlanningScene(options_.scene))
  {
    if (psws_.hasPlanningSceneWorld(options_.scene))
    {
      bool ok = false;
      try
      {
        ok = psws_.getPlanningSceneWorld(pswwm, options_.scene);
      }
      catch (std::runtime_error& ex)
      {
        ROS_ERROR("%s", ex.what());
      }
      if (!ok)
        return;
      world_only = true;
    }
    else
    {
      std::stringstream ss;
      std::vector<std::string> names;
      pss_.getPlanningSceneNames(names);
      for (std::size_t i = 0; i < names.size(); ++i)
        ss << names[i] << " ";
      ROS_ERROR("Scene '%s' not found in warehouse. Available names: %s", options_.scene.c_str(), ss.str().c_str());
      return;
    }
  }
  else
  {
    bool ok = false;
    try
    {
      ok = pss_.getPlanningScene(pswm, options_.scene);
    }
    catch (std::runtime_error& ex)
    {
      ROS_ERROR("%s", ex.what());
    }

    if (!ok)
    {
      ROS_ERROR("Scene '%s' not found in warehouse", options_.scene.c_str());
      return;
    }
  }

  // fill in the environment geometry in the benchmark request
  BenchmarkRequest req;
  req.benchmark_type = type;

  if (world_only)
  {
    req.scene.world = static_cast<const moveit_msgs::PlanningSceneWorld&>(*pswwm);
    req.scene.robot_model_name =
        "NO ROBOT INFORMATION. ONLY WORLD GEOMETRY";  // so that run_benchmark sees a different robot name
  }
  else
    req.scene = static_cast<const moveit_msgs::PlanningScene&>(*pswm);

  // check if this scene has associated queries
  req.scene.name = options_.scene;
  std::vector<std::string> planning_queries_names;
  try
  {
    pss_.getPlanningQueriesNames(options_.query_regex, planning_queries_names, options_.scene);
  }
  catch (std::runtime_error& ex)
  {
    ROS_ERROR("%s", ex.what());
  }
  if (planning_queries_names.empty())
    ROS_DEBUG("Scene '%s' has no associated queries", options_.scene.c_str());

  // fill in the plugins option
  req.plugins = options_.plugins;

  // see if we have any start states specified; if we do, we run the benchmark for
  // each start state; if not, we run it for one start state only: the current one saved in the loaded scene
  std::vector<std::string> start_states;
  if (!options_.start_regex.empty())
  {
    boost::regex start_regex(options_.start_regex);
    std::vector<std::string> state_names;
    rs_.getKnownRobotStates(state_names);
    for (std::size_t i = 0; i < state_names.size(); ++i)
    {
      boost::cmatch match;
      if (boost::regex_match(state_names[i].c_str(), match, start_regex))
        start_states.push_back(state_names[i]);
    }
    if (start_states.empty())
    {
      ROS_WARN("No stored states matched the provided regex: '%s'", options_.start_regex.c_str());
      return;
    }
    else
      ROS_INFO("Running benchmark using %u start states.", (unsigned int)start_states.size());
  }
  else
    ROS_INFO("No specified start state. Running benchmark once with the default start state.");

  unsigned int n_call = 0;
  bool have_more_start_states = true;
  boost::scoped_ptr<moveit_msgs::RobotState> start_state_to_use;
  while (have_more_start_states)
  {
    start_state_to_use.reset();

    // if no set of start states provided, run once for the current one
    if (options_.start_regex.empty())
      have_more_start_states = false;
    else
    {
      // otherwise, extract the start states one by one
      std::string state_name = start_states.back();
      start_states.pop_back();
      have_more_start_states = !start_states.empty();
      moveit_warehouse::RobotStateWithMetadata robot_state;
      bool got_robot_state = false;
      try
      {
        got_robot_state = rs_.getRobotState(robot_state, state_name);
      }
      catch (std::runtime_error& ex)
      {
        ROS_ERROR("%s", ex.what());
      }

      if (got_robot_state)
      {
        start_state_to_use.reset(new moveit_msgs::RobotState(*robot_state));
        ROS_INFO("Loaded start state '%s'", state_name.c_str());
      }
      else
        continue;
    }

    // run benchmarks for specified queries
    // ************************************

    if (!options_.query_regex.empty())
    {
      for (std::size_t i = 0; i < planning_queries_names.size(); ++i)
      {
        moveit_warehouse::MotionPlanRequestWithMetadata planning_query;
        pss_.getPlanningQuery(planning_query, options_.scene, planning_queries_names[i]);

        // Save name of goal - only used for later analysis
        req.goal_name = planning_queries_names[i];

        // read request from db
        req.motion_plan_request = static_cast<const moveit_msgs::MotionPlanRequest&>(*planning_query);

        // set the workspace bounds
        req.motion_plan_request.workspace_parameters = options_.workspace_parameters;

        // update request given .cfg options
        if (start_state_to_use)
          req.motion_plan_request.start_state = *start_state_to_use;
        req.filename = options_.output + "." + boost::lexical_cast<std::string>(++n_call) + ".log";
        if (!options_.group_override.empty())
          req.motion_plan_request.group_name = options_.group_override;

        if (options_.timeout > 0.0)
          req.motion_plan_request.allowed_planning_time = options_.timeout;

        if (!options_.default_constrained_link.empty())
        {
          checkConstrainedLink(req.motion_plan_request.path_constraints, options_.default_constrained_link);
          for (std::size_t j = 0; j < req.motion_plan_request.goal_constraints.size(); ++j)
            checkConstrainedLink(req.motion_plan_request.goal_constraints[j], options_.default_constrained_link);
        }
        if (!options_.planning_frame.empty())
        {
          checkHeader(req.motion_plan_request.path_constraints, options_.planning_frame);
          for (std::size_t j = 0; j < req.motion_plan_request.goal_constraints.size(); ++j)
            checkHeader(req.motion_plan_request.goal_constraints[j], options_.planning_frame);
        }

        ROS_INFO("Benckmarking query '%s' (%d of %d)", planning_queries_names[i].c_str(), (int)i + 1,
                 (int)planning_queries_names.size());
        runBenchmark(req);
      }
    }

    // if we have any goals specified as constraints, run benchmarks for those as well
    // *******************************************************************************

    if (!options_.goal_regex.empty())
    {
      std::vector<std::string> cnames;
      cs_.getKnownConstraints(options_.goal_regex, cnames);
      for (std::size_t i = 0; i < cnames.size(); ++i)
      {
        moveit_warehouse::ConstraintsWithMetadata constr;
        bool got_constraints = false;
        try
        {
          got_constraints = cs_.getConstraints(constr, cnames[i]);
        }
        catch (std::runtime_error& ex)
        {
          ROS_ERROR("%s", ex.what());
        }

        if (got_constraints)
        {
          // Save name of goal - only used for later analysis
          req.goal_name = cnames[i];

          // construct a planning request from the constraints message
          req.motion_plan_request = moveit_msgs::MotionPlanRequest();
          req.motion_plan_request.goal_constraints.resize(1);
          if (start_state_to_use)
            req.motion_plan_request.start_state = *start_state_to_use;
          req.motion_plan_request.goal_constraints[0] = *constr;

          // set the workspace bounds
          req.motion_plan_request.workspace_parameters = options_.workspace_parameters;

          // Apply the goal offset for constraints that appear to specify IK poses
          if (constr->position_constraints.size() == 1 && constr->orientation_constraints.size() == 1 &&
              kinematic_constraints::countIndividualConstraints(*constr) == 2 &&
              constr->position_constraints[0].constraint_region.primitive_poses.size() == 1 &&
              constr->position_constraints[0].constraint_region.mesh_poses.empty())
          {
            geometry_msgs::Pose wMc_msg;
            wMc_msg.position = constr->position_constraints[0].constraint_region.primitive_poses[0].position;
            wMc_msg.orientation = constr->orientation_constraints[0].orientation;
            Eigen::Affine3d wMc;
            tf::poseMsgToEigen(wMc_msg, wMc);

            Eigen::Affine3d offset_tf(Eigen::AngleAxis<double>(options_.offsets[3], Eigen::Vector3d::UnitX()) *
                                      Eigen::AngleAxis<double>(options_.offsets[4], Eigen::Vector3d::UnitY()) *
                                      Eigen::AngleAxis<double>(options_.offsets[5], Eigen::Vector3d::UnitZ()));
            offset_tf.translation() = Eigen::Vector3d(options_.offsets[0], options_.offsets[1], options_.offsets[2]);

            Eigen::Affine3d wMnc = wMc * offset_tf;
            geometry_msgs::Pose wMnc_msg;
            tf::poseEigenToMsg(wMnc, wMnc_msg);

            req.motion_plan_request.goal_constraints[0]
                .position_constraints[0]
                .constraint_region.primitive_poses[0]
                .position = wMnc_msg.position;
            req.motion_plan_request.goal_constraints[0].orientation_constraints[0].orientation = wMnc_msg.orientation;
          }

          if (!options_.group_override.empty())
            req.motion_plan_request.group_name = options_.group_override;
          if (options_.timeout > 0.0)
            req.motion_plan_request.allowed_planning_time = options_.timeout;
          if (!options_.default_constrained_link.empty())
            checkConstrainedLink(req.motion_plan_request.goal_constraints[0], options_.default_constrained_link);
          if (!options_.planning_frame.empty())
            checkHeader(req.motion_plan_request.goal_constraints[0], options_.planning_frame);
          req.filename = options_.output + "." + boost::lexical_cast<std::string>(++n_call) + ".log";

          ROS_INFO("Benckmarking goal '%s' (%d of %d)", cnames[i].c_str(), (int)i + 1, (int)cnames.size());
          runBenchmark(req);
        }
      }
    }

    // if we have any goals specified as trajectory constraints, run benchmarks for those as well
    // ******************************************************************************************

    if (!options_.trajectory_regex.empty())
    {
      std::vector<std::string> cnames;
      tcs_.getKnownTrajectoryConstraints(options_.trajectory_regex, cnames);
      for (std::size_t i = 0; i < cnames.size(); ++i)
      {
        moveit_warehouse::TrajectoryConstraintsWithMetadata constr;
        bool got_constraints = false;
        try
        {
          got_constraints = tcs_.getTrajectoryConstraints(constr, cnames[i]);
        }
        catch (std::runtime_error& ex)
        {
          ROS_ERROR("%s", ex.what());
        }

        // Save name of goal - only used for later analysis
        req.goal_name = cnames[i];

        if (got_constraints)
        {
          // construct a planning request from the trajectory constraints message
          req.motion_plan_request = moveit_msgs::MotionPlanRequest();
          if (start_state_to_use)
            req.motion_plan_request.start_state = *start_state_to_use;
          req.motion_plan_request.trajectory_constraints = *constr;

          // set the workspace bounds
          req.motion_plan_request.workspace_parameters = options_.workspace_parameters;

          Eigen::Affine3d offset_tf(Eigen::AngleAxis<double>(options_.offsets[3], Eigen::Vector3d::UnitX()) *
                                    Eigen::AngleAxis<double>(options_.offsets[4], Eigen::Vector3d::UnitY()) *
                                    Eigen::AngleAxis<double>(options_.offsets[5], Eigen::Vector3d::UnitZ()));
          offset_tf.translation() = Eigen::Vector3d(options_.offsets[0], options_.offsets[1], options_.offsets[2]);

          // Apply waypoint offsets, check fields
          for (std::size_t tc = 0; tc < constr->constraints.size(); ++tc)
          {
            // Apply the goal offset for constraints that appear to specify IK poses
            if (constr->constraints[tc].position_constraints.size() == 1 &&
                constr->constraints[tc].orientation_constraints.size() == 1 &&
                kinematic_constraints::countIndividualConstraints(constr->constraints[tc]) == 2 &&
                constr->constraints[tc].position_constraints[0].constraint_region.primitive_poses.size() == 1 &&
                constr->constraints[tc].position_constraints[0].constraint_region.mesh_poses.empty())
            {
              geometry_msgs::Pose wMc_msg;
              wMc_msg.position = req.motion_plan_request.trajectory_constraints.constraints[tc]
                                     .position_constraints[0]
                                     .constraint_region.primitive_poses[0]
                                     .position;
              wMc_msg.orientation =
                  req.motion_plan_request.trajectory_constraints.constraints[tc].orientation_constraints[0].orientation;
              Eigen::Affine3d wMc;
              tf::poseMsgToEigen(wMc_msg, wMc);

              Eigen::Affine3d wMnc = wMc * offset_tf;
              geometry_msgs::Pose wMnc_msg;
              tf::poseEigenToMsg(wMnc, wMnc_msg);

              req.motion_plan_request.trajectory_constraints.constraints[tc]
                  .position_constraints[0]
                  .constraint_region.primitive_poses[0]
                  .position = wMnc_msg.position;
              req.motion_plan_request.trajectory_constraints.constraints[tc].orientation_constraints[0].orientation =
                  wMnc_msg.orientation;
            }
            if (!options_.default_constrained_link.empty())
              checkConstrainedLink(req.motion_plan_request.trajectory_constraints.constraints[tc],
                                   options_.default_constrained_link);
            if (!options_.planning_frame.empty())
              checkHeader(req.motion_plan_request.trajectory_constraints.constraints[tc], options_.planning_frame);
          }

          if (!options_.group_override.empty())
            req.motion_plan_request.group_name = options_.group_override;
          if (options_.timeout > 0.0)
            req.motion_plan_request.allowed_planning_time = options_.timeout;
          req.filename = options_.output + ".trajectory." + boost::lexical_cast<std::string>(i + 1) + ".log";

          ROS_INFO("Benckmarking trajectory '%s' (%d of %d)", cnames[i].c_str(), (int)i + 1, (int)cnames.size());
          runBenchmark(req);
        }
      }
    }
  }
}

bool moveit_benchmarks::BenchmarkExecution::readOptions(const std::string& filename)
{
  ROS_INFO("Loading '%s'...", filename.c_str());

  std::ifstream cfg(filename.c_str());
  if (!cfg.good())
  {
    ROS_ERROR_STREAM("Unable to open file '" << filename << "'");
    return false;
  }

  // "scene" options
  try
  {
    boost::program_options::options_description desc;
    desc.add_options()("scene.name", boost::program_options::value<std::string>(), "Scene name")(
        "scene.runs", boost::program_options::value<std::string>()->default_value("1"), "Number of runs")(
        "scene.timeout", boost::program_options::value<std::string>()->default_value(""),
        "Timeout for planning (s)")("scene.start", boost::program_options::value<std::string>()->default_value(""),
                                    "Regex for the start states to use")(
        "scene.query", boost::program_options::value<std::string>()->default_value(".*"),
        "Regex for the queries to execute")("scene.goal",
                                            boost::program_options::value<std::string>()->default_value(""),
                                            "Regex for the names of constraints to use as goals")(
        "scene.trajectory", boost::program_options::value<std::string>()->default_value(""),
        "Regex for the names of constraints to use as trajectories")(
        "scene.group", boost::program_options::value<std::string>()->default_value(""),
        "Override the group to plan for")("scene.planning_frame",
                                          boost::program_options::value<std::string>()->default_value(""),
                                          "Override the planning frame to use")(
        "scene.default_constrained_link", boost::program_options::value<std::string>()->default_value(""),
        "Specify the default link to consider as constrained when one is not specified in a moveit_msgs::Constraints "
        "message")("scene.goal_offset_x", boost::program_options::value<std::string>()->default_value("0.0"),
                   "Goal offset in x")(
        "scene.goal_offset_y", boost::program_options::value<std::string>()->default_value("0.0"), "Goal offset in y")(
        "scene.goal_offset_z", boost::program_options::value<std::string>()->default_value("0.0"),
        "Goal offset in z")("scene.goal_offset_roll",
                            boost::program_options::value<std::string>()->default_value("0.0"), "Goal offset in roll")(
        "scene.goal_offset_pitch", boost::program_options::value<std::string>()->default_value("0.0"),
        "Goal offset in pitch")("scene.goal_offset_yaw",
                                boost::program_options::value<std::string>()->default_value("0.0"),
                                "Goal offset in yaw")("scene.output", boost::program_options::value<std::string>(),
                                                      "Location of benchmark log file")(
        "scene.workspace", boost::program_options::value<std::string>(), "Bounding box of workspace to plan in - "
                                                                         "min_x, min_y, min_z, max_x, max_y, max_z")(
        "scene.workspace_frame", boost::program_options::value<std::string>(), "Frame id of bounding box of workspace "
                                                                               "to plan in");

    boost::program_options::variables_map vm;
    boost::program_options::parsed_options po = boost::program_options::parse_config_file(cfg, desc, true);

    cfg.close();
    boost::program_options::store(po, vm);

    std::map<std::string, std::string> declared_options;
    for (boost::program_options::variables_map::iterator it = vm.begin(); it != vm.end(); ++it)
      declared_options[it->first] = boost::any_cast<std::string>(vm[it->first].value());

    options_.scene = declared_options["scene.name"];
    options_.start_regex = declared_options["scene.start"];
    options_.query_regex = declared_options["scene.query"];
    options_.goal_regex = declared_options["scene.goal"];
    options_.trajectory_regex = declared_options["scene.trajectory"];
    options_.group_override = declared_options["scene.group"];
    options_.default_constrained_link = declared_options["scene.default_constrained_link"];
    options_.planning_frame = declared_options["scene.planning_frame"];
    try
    {
      memset(options_.offsets, 0, 6 * sizeof(double));
      if (!declared_options["scene.goal_offset_x"].empty())
        options_.offsets[0] = boost::lexical_cast<double>(declared_options["scene.goal_offset_x"]);
      if (!declared_options["scene.goal_offset_y"].empty())
        options_.offsets[1] = boost::lexical_cast<double>(declared_options["scene.goal_offset_y"]);
      if (!declared_options["scene.goal_offset_z"].empty())
        options_.offsets[2] = boost::lexical_cast<double>(declared_options["scene.goal_offset_z"]);
      if (!declared_options["scene.goal_offset_roll"].empty())
        options_.offsets[3] = boost::lexical_cast<double>(declared_options["scene.goal_offset_roll"]);
      if (!declared_options["scene.goal_offset_pitch"].empty())
        options_.offsets[4] = boost::lexical_cast<double>(declared_options["scene.goal_offset_pitch"]);
      if (!declared_options["scene.goal_offset_yaw"].empty())
        options_.offsets[5] = boost::lexical_cast<double>(declared_options["scene.goal_offset_yaw"]);
    }
    catch (boost::bad_lexical_cast& ex)
    {
      ROS_WARN("%s", ex.what());
    }

    // Workspace bounds
    if (!declared_options["scene.workspace"].empty())
    {
      std::vector<std::string> strings;
      boost::split(strings, declared_options["scene.workspace"], boost::is_any_of(","));

      if (strings.size() != 6)
      {
        ROS_WARN_STREAM("Invalid number of workspace parameters. Expected 6, recieved " << strings.size());
      }
      else if (declared_options["scene.workspace_frame"].empty())
      {
        ROS_WARN_STREAM("No workspace_frame parameter provided, required with the workspace frame");
      }
      else
      {
        try
        {
          // add workspace bounds if specified in the .cfg file
          options_.workspace_parameters.header.frame_id = declared_options["scene.workspace_frame"];
          options_.workspace_parameters.header.stamp = ros::Time::now();
          options_.workspace_parameters.min_corner.x = boost::lexical_cast<double>(strings[0]);
          options_.workspace_parameters.min_corner.y = boost::lexical_cast<double>(strings[1]);
          options_.workspace_parameters.min_corner.z = boost::lexical_cast<double>(strings[2]);
          options_.workspace_parameters.max_corner.x = boost::lexical_cast<double>(strings[3]);
          options_.workspace_parameters.max_corner.y = boost::lexical_cast<double>(strings[4]);
          options_.workspace_parameters.max_corner.z = boost::lexical_cast<double>(strings[5]);
        }
        catch (boost::bad_lexical_cast& ex)
        {
          ROS_WARN("%s", ex.what());
        }
      }
    }

    // Filename
    options_.output = declared_options["scene.output"];
    if (options_.output.empty())
      options_.output = filename;

    options_.plugins.clear();

    // Runs
    std::size_t default_run_count = 1;
    if (!declared_options["scene.runs"].empty())
    {
      try
      {
        default_run_count = boost::lexical_cast<std::size_t>(declared_options["scene.runs"]);
      }
      catch (boost::bad_lexical_cast& ex)
      {
        ROS_WARN("%s", ex.what());
      }
    }
    options_.default_run_count = default_run_count;

    // Timeout
    options_.timeout = 0.0;
    if (!declared_options["scene.timeout"].empty())
    {
      try
      {
        options_.timeout = boost::lexical_cast<double>(declared_options["scene.timeout"]);
      }
      catch (boost::bad_lexical_cast& ex)
      {
        ROS_WARN("%s", ex.what());
      }
    }

    // Process non-scene options
    std::vector<std::string> unr =
        boost::program_options::collect_unrecognized(po.options, boost::program_options::exclude_positional);

    boost::scoped_ptr<PlanningPluginOptions> bpo;
    for (std::size_t i = 0; i < unr.size() / 2; ++i)
    {
      std::string key = boost::to_lower_copy(unr[i * 2]);
      std::string val = unr[i * 2 + 1];

      // "plugin" options
      if (key.substr(0, 7) == "plugin.")
      {
        std::string k = key.substr(7);
        if (k == "name")
        {
          if (bpo)
            options_.plugins.push_back(*bpo);
          bpo.reset(new PlanningPluginOptions());
          bpo->name = val;
          bpo->runs = default_run_count;
        }
        else if (k == "runs")
        {
          if (bpo)
          {
            try
            {
              bpo->runs = boost::lexical_cast<std::size_t>(val);
            }
            catch (boost::bad_lexical_cast& ex)
            {
              ROS_WARN("%s", ex.what());
            }
          }
          else
            ROS_WARN("Ignoring option '%s' = '%s'. Please include plugin name first.", key.c_str(), val.c_str());
        }
        else if (k == "planners")
        {
          if (bpo)
          {
            boost::char_separator<char> sep(" ");
            boost::tokenizer<boost::char_separator<char> > tok(val, sep);
            for (boost::tokenizer<boost::char_separator<char> >::iterator beg = tok.begin(); beg != tok.end(); ++beg)
              bpo->planners.push_back(*beg);
          }
          else
            ROS_WARN("Ignoring option '%s' = '%s'. Please include plugin name first.", key.c_str(), val.c_str());
        }
      }
      // parameter sweeping option
      else if (key.substr(0, 6) == "sweep.")
      {
        std::string sweep_var = key.substr(6);

        // Convert the string of a:b:c numbers into parsed doubles
        std::vector<std::string> strings;
        boost::split(strings, val, boost::is_any_of(":"));

        if (strings.size() != 3)
        {
          ROS_WARN_STREAM("Invalid sweep parameter for key "
                          << sweep_var << ". Expected 3 values (start, iterator, end) but only recieved "
                          << strings.size());
          continue;
        }

        ParameterOptions new_sweep;
        new_sweep.is_sweep = true;  // not a fractional factorial analaysis
        try
        {
          new_sweep.start = boost::lexical_cast<double>(strings[0]);
          new_sweep.step_size = boost::lexical_cast<double>(strings[1]);
          new_sweep.end = boost::lexical_cast<double>(strings[2]);
          new_sweep.key = sweep_var;
          // for logging to file:
          std::ostringstream ss;
          ss << "param_" << sweep_var << " REAL";
          new_sweep.log_key = ss.str();
        }
        catch (boost::bad_lexical_cast& ex)
        {
          ROS_WARN("%s", ex.what());
        }

        // Error check
        if (new_sweep.start > new_sweep.end)
        {
          ROS_ERROR_STREAM("Invalid sweep parameter for key " << sweep_var << ". Start is greater than end");
          continue;
        }

        // Insert into array of all sweeps
        param_options_.push_back(new_sweep);
      }
      else
      {
        ROS_WARN("Unknown option: '%s' = '%s'", key.c_str(), val.c_str());
        continue;
      }
    }
    if (bpo)
      options_.plugins.push_back(*bpo);
  }

  catch (...)
  {
    ROS_ERROR_STREAM("Unable to parse '" << filename << "'");
    return false;
  }

  return true;
}

void moveit_benchmarks::BenchmarkExecution::printOptions(std::ostream& out)
{
  out << "Benchmark for scene '" << options_.scene << "' to be saved at location '" << options_.output << "'"
      << std::endl;
  if (!options_.query_regex.empty())
    out << "Planning requests associated to the scene that match '" << options_.query_regex << "' will be evaluated"
        << std::endl;
  if (!options_.goal_regex.empty())
    out << "Planning requests constructed from goal constraints that match '" << options_.goal_regex
        << "' will be evaluated" << std::endl;
  if (!options_.trajectory_regex.empty())
    out << "Planning requests constructed from trajectory constraints that match '" << options_.trajectory_regex
        << "' will be evaluated" << std::endl;
  out << "Plugins:" << std::endl;
  for (std::size_t i = 0; i < options_.plugins.size(); ++i)
  {
    out << "   * name: " << options_.plugins[i].name << " (to be run " << options_.plugins[i].runs
        << " times for each planner)" << std::endl;
    out << "   * planners:";
    for (std::size_t j = 0; j < options_.plugins[i].planners.size(); ++j)
      out << ' ' << options_.plugins[i].planners[j];
    out << std::endl;
  }
}

void moveit_benchmarks::BenchmarkExecution::runBenchmark(BenchmarkRequest& req)
{
  if (req.benchmark_type & BENCHMARK_PLANNERS)
    runPlanningBenchmark(req);
  if (req.benchmark_type & BENCHMARK_GOAL_EXISTANCE)
    runGoalExistenceBenchmark(req);
}

void moveit_benchmarks::BenchmarkExecution::collectMetrics(RunData& rundata,
                                                           const planning_interface::MotionPlanDetailedResponse& mp_res,
                                                           bool solved, double total_time)
{
  rundata["total_time REAL"] = boost::lexical_cast<std::string>(total_time);
  rundata["solved BOOLEAN"] = boost::lexical_cast<std::string>(solved);
  double L = 0.0;
  double clearance = 0.0;
  double smoothness = 0.0;
  bool correct = true;
  if (solved)
  {
    double process_time = total_time;
    for (std::size_t j = 0; j < mp_res.trajectory_.size(); ++j)
    {
      correct = true;
      L = 0.0;
      clearance = 0.0;
      smoothness = 0.0;
      const robot_trajectory::RobotTrajectory& p = *mp_res.trajectory_[j];

      // compute path length
      for (std::size_t k = 1; k < p.getWayPointCount(); ++k)
        L += p.getWayPoint(k - 1).distance(p.getWayPoint(k));

      // compute correctness and clearance
      collision_detection::CollisionRequest req;
      for (std::size_t k = 0; k < p.getWayPointCount(); ++k)
      {
        collision_detection::CollisionResult res;
        planning_scene_->checkCollisionUnpadded(req, res, p.getWayPoint(k));
        if (res.collision)
          correct = false;
        if (!p.getWayPoint(k).satisfiesBounds())
          correct = false;
        double d = planning_scene_->distanceToCollisionUnpadded(p.getWayPoint(k));
        if (d > 0.0)  // in case of collision, distance is negative
          clearance += d;
      }
      clearance /= (double)p.getWayPointCount();

      // compute smoothness
      if (p.getWayPointCount() > 2)
      {
        double a = p.getWayPoint(0).distance(p.getWayPoint(1));
        for (std::size_t k = 2; k < p.getWayPointCount(); ++k)
        {
          // view the path as a sequence of segments, and look at the triangles it forms:
          //          s1
          //          /\          s4
          //      a  /  \ b       |
          //        /    \        |
          //       /......\_______|
          //     s0    c   s2     s3
          //
          // use Pythagoras generalized theorem to find the cos of the angle between segments a and b
          double b = p.getWayPoint(k - 1).distance(p.getWayPoint(k));
          double cdist = p.getWayPoint(k - 2).distance(p.getWayPoint(k));
          double acosValue = (a * a + b * b - cdist * cdist) / (2.0 * a * b);
          if (acosValue > -1.0 && acosValue < 1.0)
          {
            // the smoothness is actually the outside angle of the one we compute
            double angle = (boost::math::constants::pi<double>() - acos(acosValue));

            // and we normalize by the length of the segments
            double u = 2.0 * angle;  
            smoothness += u * u;
          }
          a = b;
        }
        smoothness /= (double)p.getWayPointCount();
      }
      rundata["path_" + mp_res.description_[j] + "_correct BOOLEAN"] = boost::lexical_cast<std::string>(correct);
      rundata["path_" + mp_res.description_[j] + "_length REAL"] = boost::lexical_cast<std::string>(L);
      rundata["path_" + mp_res.description_[j] + "_clearance REAL"] = boost::lexical_cast<std::string>(clearance);
      rundata["path_" + mp_res.description_[j] + "_smoothness REAL"] = boost::lexical_cast<std::string>(smoothness);
      rundata["path_" + mp_res.description_[j] + "_time REAL"] =
          boost::lexical_cast<std::string>(mp_res.processing_time_[j]);
      process_time -= mp_res.processing_time_[j];
    }
    if (process_time <= 0.0)
      process_time = 0.0;
    rundata["process_time REAL"] = boost::lexical_cast<std::string>(process_time);
  }
}

namespace
{
bool isIKSolutionCollisionFree(const planning_scene::PlanningScene* scene, robot_state::RobotState* state,
                               const robot_model::JointModelGroup* group, const double* ik_solution, bool* reachable)
{
  state->setJointGroupPositions(group, ik_solution);
  state->update();
  *reachable = true;
  if (scene->isStateColliding(*state, group->getName(), false))
    return false;
  else
    return true;
}
}

void moveit_benchmarks::BenchmarkExecution::runPlanningBenchmark(BenchmarkRequest& req)
{
  /* Dev Notes:
   *   planner_interface => planning plugin
   *   planner => planning algorithm within a planning plugin
   *   planner_ids => id of a planner
   */

  // check that all requested plugins exist
  if (!req.plugins.empty())
    for (std::size_t i = 0; i < req.plugins.size(); ++i)
      if (planner_interfaces_.find(req.plugins[i].name) == planner_interfaces_.end())
        ROS_ERROR("Planning interface '%s' was not found", req.plugins[i].name.c_str());

  // pointer list of planning plugins
  std::vector<planning_interface::PlannerManager*> planner_interfaces_to_benchmark;

  // each planning plugin has a vector of its sub algorithms (planners) that it can run
  std::vector<std::vector<std::string> > planner_ids_to_benchmark_per_planner_interface;

  // number of runs to execute every *algorithm* per *plugin*
  std::vector<std::size_t> runs_per_planner_interface;  // average_count_per_planner_interface

  planning_interface::MotionPlanRequest motion_plan_req = req.motion_plan_request;

  // loop through each planning interface
  for (std::map<std::string, planning_interface::PlannerManagerPtr>::const_iterator it = planner_interfaces_.begin();
       it != planner_interfaces_.end(); ++it)
  {
    // find the plugin that the planning interface belongs to
    int found = -1;
    if (!req.plugins.empty())
    {
      for (std::size_t i = 0; i < req.plugins.size(); ++i)
      {
        if (req.plugins[i].name == it->first)  // this benchmark request includes this planning plugin
        {
          found = i;
          break;
        }
      }
      if (found < 0)
        continue;
    }

    // Determine whether this plugin instance is able to represent this planning request
    if (it->second->canServiceRequest(motion_plan_req))
    {
      // copy the pointer of the planner_interface
      planner_interfaces_to_benchmark.push_back(it->second.get());

      // add new rows to the "mapper" for the new planner_interface
      planner_ids_to_benchmark_per_planner_interface.resize(planner_ids_to_benchmark_per_planner_interface.size() + 1);
      runs_per_planner_interface.resize(runs_per_planner_interface.size() + 1, 1);  // TODO: a vector does not need to
                                                                                    // be resized, it does so
                                                                                    // automatically right??

      // get a list of all the algorithms that the planner can use
      std::vector<std::string> known;
      it->second->getPlanningAlgorithms(known);

      if (found < 0 || req.plugins[found].planners.empty())
      {
        // no algorithms found OR this benchmark request does not use this algorithm
        planner_ids_to_benchmark_per_planner_interface.back() = known;
      }
      else
      {
        runs_per_planner_interface.back() =
            std::max<std::size_t>(1, req.plugins[found].runs);  // TODO: change it here too

        // loop through every planner(algorithm) in this plugin that the benchmark request desires
        for (std::size_t k = 0; k < req.plugins[found].planners.size(); ++k)
        {
          bool planner_found = false;
          for (std::size_t q = 0; q < known.size(); ++q)
          {
            // Check if the requested planner is actually in the plugin
            if (known[q] == req.plugins[found].planners[k] ||
                motion_plan_req.group_name + "[" + req.plugins[found].planners[k] + "]" == known[q])
            {
              planner_found = true;
              break;
            }
          }
          if (planner_found)
            planner_ids_to_benchmark_per_planner_interface.back().push_back(req.plugins[found].planners[k]);
          else
          {
            ROS_ERROR("The planner id '%s' is not known to the planning interface '%s'",
                      req.plugins[found].planners[k].c_str(), it->first.c_str());
            // To help user debug, list all available planners:
            ROS_ERROR_STREAM("Known algorithms in " << it->first.c_str() << ":");
            for (std::size_t i = 0; i < known.size(); ++i)
            {
              ROS_ERROR_STREAM(" - " << known[i]);
            }
          }
        }
      }

      if (planner_ids_to_benchmark_per_planner_interface.back().empty())
        ROS_ERROR("Planning interface '%s' has no planners defined", it->first.c_str());
    }
    else
      ROS_WARN_STREAM("Planning interface '" << it->second->getDescription() << "' is not able to solve the specified "
                                                                                "benchmark problem.");
  }

  // error check
  if (planner_interfaces_to_benchmark.empty())
  {
    ROS_ERROR("There are no planning interfaces to benchmark");
    return;
  }

  // output information about planners to be tested
  std::stringstream sst;
  for (std::size_t i = 0; i < planner_interfaces_to_benchmark.size(); ++i)
  {
    if (planner_ids_to_benchmark_per_planner_interface[i].empty())
      continue;
    sst << "  * " << planner_interfaces_to_benchmark[i]->getDescription() << " - Will execute interface "
        << runs_per_planner_interface[i] << " times:" << std::endl;
    for (std::size_t k = 0; k < planner_ids_to_benchmark_per_planner_interface[i].size(); ++k)
      sst << "    - " << planner_ids_to_benchmark_per_planner_interface[i][k] << std::endl;
    sst << std::endl;
  }
  ROS_INFO("Benchmarking Planning Interfaces:\n%s", sst.str().c_str());

  // configure planning context
  if (req.scene.robot_model_name != planning_scene_->getRobotModel()->getName())
  {
    // if we have a different robot, use the world geometry only

    // clear all geometry from the scene
    planning_scene_->getWorldNonConst()->clearObjects();
    planning_scene_->getCurrentStateNonConst().clearAttachedBodies();
    planning_scene_->getCurrentStateNonConst().setToDefaultValues();

    planning_scene_->processPlanningSceneWorldMsg(req.scene.world);
  }
  else
    planning_scene_->usePlanningSceneMsg(req.scene);

  // parameter sweeping functionality
  std::size_t n_parameter_sets = generateParamCombinations();  // this is for parameter sweeping

  // get stats on how many planners and total runs will be executed
  std::size_t total_n_planners = 0;
  std::size_t total_n_runs = 0;
  for (std::size_t i = 0; i < planner_ids_to_benchmark_per_planner_interface.size(); ++i)
  {
    total_n_planners += planner_ids_to_benchmark_per_planner_interface[i].size();

    // n = algorithms * runs * parameters
    total_n_runs +=
        planner_ids_to_benchmark_per_planner_interface[i].size() * runs_per_planner_interface[i] * n_parameter_sets;
  }

  // benchmark all the planners
  ros::WallTime startTime = ros::WallTime::now();
  boost::progress_display progress(total_n_runs, std::cout);
  std::vector<AlgorithmRunsData> data;  // holds all of the results
  std::vector<bool> first_solution_flag(planner_interfaces_to_benchmark.size(), true);

  // loop through the planning plugins
  for (std::size_t i = 0; i < planner_interfaces_to_benchmark.size(); ++i)
  {
    // loop through the algorithms in each plugin
    for (std::size_t j = 0; j < planner_ids_to_benchmark_per_planner_interface[i].size(); ++j)
    {
      motion_plan_req.planner_id = planner_ids_to_benchmark_per_planner_interface[i][j];
      AlgorithmRunsData runs(runs_per_planner_interface[i] * n_parameter_sets);

      // param tracking
      std::size_t param_combinations_id_ = 0;

      // loop through the desired parameters
      for (std::size_t param_count = 0; param_count < n_parameter_sets; ++param_count)
      {
        // Check if ROS is still alive
        if (!ros::ok())
          return;

        // Create new instance of the chosen parameters
        RunData parameter_data;

        // apply the current parameter, if we are using those
        if (n_parameter_sets > 1)
        {
          modifyPlannerConfiguration(*planner_interfaces_to_benchmark[i], motion_plan_req.planner_id,
                                     param_combinations_id_, parameter_data);
          ++param_combinations_id_;
        }

        planning_interface::PlanningContextPtr pcontext =
            planner_interfaces_to_benchmark[i]->getPlanningContext(planning_scene_, motion_plan_req);

        // loop through the desired number of runs
        for (unsigned int run_count = 0; run_count < runs_per_planner_interface[i]; ++run_count)
        {
          // Combine two for loops into one id
          std::size_t run_id = run_count * n_parameter_sets + param_count;

          ++progress;  // this outputs asterisks

          // run a single benchmark
          ROS_DEBUG("Calling %s:%s", planner_interfaces_to_benchmark[i]->getDescription().c_str(),
                    motion_plan_req.planner_id.c_str());
          planning_interface::MotionPlanDetailedResponse mp_res;
          ros::WallTime start = ros::WallTime::now();
          bool solved = pcontext->solve(mp_res);
          double total_time = (ros::WallTime::now() - start).toSec();

          // collect data
          start = ros::WallTime::now();
          runs[run_id].insert(parameter_data.begin(), parameter_data.end());  // initalize this run's data with the
                                                                              // chosen parameters, if we have any

          collectMetrics(runs[run_id], mp_res, solved, total_time);
          double metrics_time = (ros::WallTime::now() - start).toSec();
          ROS_DEBUG("Spent %lf seconds collecting metrics", metrics_time);

          // record the first solution in the response
          if (solved && first_solution_flag[i])
          {
            first_solution_flag[i] = false;
          }
        }
      }
      // this vector of runs represents all the runs*parameters
      data.push_back(runs);

    }  // end j - planning algoritms
  }    // end i - planning plugins

  double duration = (ros::WallTime::now() - startTime).toSec();
  std::string host = moveit_benchmarks::getHostname();
  std::string filename = req.filename.empty() ?
                             ("moveit_benchmarks_" + host + "_" +
                              boost::posix_time::to_iso_extended_string(startTime.toBoost()) + ".log") :
                             req.filename;
  std::ofstream out(filename.c_str());
  out << "Experiment " << (planning_scene_->getName().empty() ? "NO_NAME" : planning_scene_->getName()) << std::endl;
  out << "Running on " << (host.empty() ? "UNKNOWN" : host) << std::endl;
  out << "Starting at " << boost::posix_time::to_iso_extended_string(startTime.toBoost()) << std::endl;
  out << "Goal name " << (req.goal_name.empty() ? "UNKNOWN" : req.goal_name) << std::endl;
  // out << "<<<|" << std::endl << "ROS" << std::endl << req.motion_plan_request << std::endl << "|>>>" << std::endl;
  out << req.motion_plan_request.allowed_planning_time << " seconds per run" << std::endl;
  out << duration << " seconds spent to collect the data" << std::endl;
  out << total_n_planners << " planners" << std::endl;

  // tracks iteration location in data[] vector
  std::size_t run_id = 0;

  // loop through the planning *plugins*
  for (std::size_t q = 0; q < planner_interfaces_to_benchmark.size(); ++q)
  {
    // loop through the planning *algorithms* times the # parameter combinations
    for (std::size_t p = 0; p < planner_ids_to_benchmark_per_planner_interface[q].size(); ++p)
    {
      // Output name of planning algorithm
      out << planner_interfaces_to_benchmark[q]->getDescription() + "_" +
                 planner_ids_to_benchmark_per_planner_interface[q][p]
          << std::endl;

      // in general, we could have properties specific for a planner;
      // right now, we do not include such properties
      out << "0 common properties" << std::endl;

      // construct the list of all possible properties for all runs
      std::set<std::string> properties_set;
      for (std::size_t j = 0; j < std::size_t(data[run_id].size()); ++j)
      {
        for (RunData::const_iterator mit = data[run_id][j].begin(); mit != data[run_id][j].end(); ++mit)
        {
          properties_set.insert(mit->first);
        }
      }

      // copy that set to a vector of properties
      std::vector<std::string> properties;
      for (std::set<std::string>::iterator it = properties_set.begin(); it != properties_set.end(); ++it)
        properties.push_back(*it);
      out << properties.size() << " properties for each run" << std::endl;

      // output the vector of properties to the log file
      for (unsigned int j = 0; j < properties.size(); ++j)
        out << properties[j] << std::endl;
      out << data[run_id].size() << " runs" << std::endl;

      // output all the data to the log file
      for (std::size_t j = 0; j < data[run_id].size(); ++j)
      {
        for (unsigned int k = 0; k < properties.size(); ++k)
        {
          // check if this current row contains each property
          RunData::const_iterator it = data[run_id][j].find(properties[k]);
          if (it != data[run_id][j].end())
            out << it->second;
          out << "; ";
        }

        // end the line
        out << std::endl;
      }
      out << '.' << std::endl;

      ++run_id;
    }
  }

  out.close();
  ROS_INFO("Results saved to '%s'", filename.c_str());
}

void moveit_benchmarks::BenchmarkExecution::runGoalExistenceBenchmark(BenchmarkRequest& req)
{
  // configure planning context
  if (req.scene.robot_model_name != planning_scene_->getRobotModel()->getName())
  {
    // if we have a different robot, use the world geometry only
    // clear all geometry from the scene
    planning_scene_->getWorldNonConst()->clearObjects();
    planning_scene_->getCurrentStateNonConst().clearAttachedBodies();
    planning_scene_->getCurrentStateNonConst().setToDefaultValues();

    planning_scene_->processPlanningSceneWorldMsg(req.scene.world);
    planning_scene_->setName(req.scene.name);
  }
  else
    planning_scene_->usePlanningSceneMsg(req.scene);

  // \todo the code below needs to be replaced with using constraint samplers;

  if (req.motion_plan_request.goal_constraints.size() == 0 &&
      req.motion_plan_request.goal_constraints[0].position_constraints.size() == 0 &&
      req.motion_plan_request.goal_constraints[0].position_constraints[0].constraint_region.primitive_poses.size() ==
          0 &&
      req.motion_plan_request.goal_constraints[0].orientation_constraints.size() == 0 &&
      req.motion_plan_request.trajectory_constraints.constraints.size() == 0)
  {
    ROS_ERROR("Invalid goal constraints");
    return;
  }

  bool success = false;
  bool reachable = false;
  if (req.motion_plan_request.goal_constraints.size() > 0 &&
      req.motion_plan_request.goal_constraints[0].position_constraints.size() > 0 &&
      req.motion_plan_request.goal_constraints[0].position_constraints[0].constraint_region.primitive_poses.size() >
          0 &&
      req.motion_plan_request.goal_constraints[0].orientation_constraints.size() > 0)
  {
    // Compute IK on goal constraints
    geometry_msgs::Pose ik_pose;
    ik_pose.position.x = req.motion_plan_request.goal_constraints[0]
                             .position_constraints[0]
                             .constraint_region.primitive_poses[0]
                             .position.x;
    ik_pose.position.y = req.motion_plan_request.goal_constraints[0]
                             .position_constraints[0]
                             .constraint_region.primitive_poses[0]
                             .position.y;
    ik_pose.position.z = req.motion_plan_request.goal_constraints[0]
                             .position_constraints[0]
                             .constraint_region.primitive_poses[0]
                             .position.z;
    ik_pose.orientation.x = req.motion_plan_request.goal_constraints[0].orientation_constraints[0].orientation.x;
    ik_pose.orientation.y = req.motion_plan_request.goal_constraints[0].orientation_constraints[0].orientation.y;
    ik_pose.orientation.z = req.motion_plan_request.goal_constraints[0].orientation_constraints[0].orientation.z;
    ik_pose.orientation.w = req.motion_plan_request.goal_constraints[0].orientation_constraints[0].orientation.w;

    robot_state::RobotState robot_state(planning_scene_->getCurrentState());
    robot_state::robotStateMsgToRobotState(req.motion_plan_request.start_state, robot_state);

    // Compute IK
    ROS_INFO_STREAM("Processing goal " << req.motion_plan_request.goal_constraints[0].name << " ...");
    ros::WallTime startTime = ros::WallTime::now();
    success = robot_state.setFromIK(
        robot_state.getJointModelGroup(req.motion_plan_request.group_name), ik_pose,
        req.motion_plan_request.num_planning_attempts, req.motion_plan_request.allowed_planning_time,
        boost::bind(&isIKSolutionCollisionFree, planning_scene_.get(), _1, _2, _3, &reachable));
    if (success)
    {
      ROS_INFO("  Success!");
    }
    else if (reachable)
    {
      ROS_INFO("  Reachable, but in collision");
    }
    else
    {
      ROS_INFO("  Not reachable");
    }
    // Log
    double duration = (ros::WallTime::now() - startTime).toSec();
    std::string host = moveit_benchmarks::getHostname();
    std::string filename = req.filename.empty() ?
                               ("moveit_benchmarks_" + host + "_" +
                                boost::posix_time::to_iso_extended_string(startTime.toBoost()) + ".log") :
                               req.filename;
    std::ofstream out(filename.c_str());
    out << "Experiment " << (planning_scene_->getName().empty() ? "NO_NAME" : planning_scene_->getName()) << std::endl;
    out << "Running on " << (host.empty() ? "UNKNOWN" : host) << std::endl;
    out << "Starting at " << boost::posix_time::to_iso_extended_string(startTime.toBoost()) << std::endl;
    out << "<<<|" << std::endl << "ROS" << std::endl << req.motion_plan_request << std::endl << "|>>>" << std::endl;
    out << req.motion_plan_request.allowed_planning_time << " seconds per run" << std::endl;
    out << duration << " seconds spent to collect the data" << std::endl;
    out << "reachable BOOLEAN" << std::endl;
    out << "collision_free BOOLEAN" << std::endl;
    out << "total_time REAL" << std::endl;
    out << reachable << "; " << success << "; " << duration << std::endl;
    out.close();
    ROS_INFO("Results saved to '%s'", filename.c_str());
  }

  if (req.motion_plan_request.trajectory_constraints.constraints.size() > 0)
  {
    // Compute IK on trajectory constraints
    // Start Log
    ros::WallTime startTime = ros::WallTime::now();
    std::string host = moveit_benchmarks::getHostname();
    std::string filename = req.filename.empty() ?
                               ("moveit_benchmarks_" + host + "_" +
                                boost::posix_time::to_iso_extended_string(startTime.toBoost()) + ".log") :
                               req.filename;
    std::ofstream out(filename.c_str());
    out << "Experiment " << (planning_scene_->getName().empty() ? "NO_NAME" : planning_scene_->getName()) << std::endl;
    out << "Running on " << (host.empty() ? "UNKNOWN" : host) << std::endl;
    out << "Starting at " << boost::posix_time::to_iso_extended_string(startTime.toBoost()) << std::endl;
    out << "<<<|" << std::endl << "ROS" << std::endl << req.motion_plan_request << std::endl << "|>>>" << std::endl;
    out << req.motion_plan_request.allowed_planning_time << " seconds per run" << std::endl;
    out << "reachable BOOLEAN" << std::endl;
    out << "collision_free BOOLEAN" << std::endl;
    out << "total_time REAL" << std::endl;

    for (std::size_t tc = 0; tc < req.motion_plan_request.trajectory_constraints.constraints.size(); ++tc)
    {
      geometry_msgs::Pose ik_pose;
      ik_pose.position.x = req.motion_plan_request.trajectory_constraints.constraints[tc]
                               .position_constraints[0]
                               .constraint_region.primitive_poses[0]
                               .position.x;
      ik_pose.position.y = req.motion_plan_request.trajectory_constraints.constraints[tc]
                               .position_constraints[0]
                               .constraint_region.primitive_poses[0]
                               .position.y;
      ik_pose.position.z = req.motion_plan_request.trajectory_constraints.constraints[tc]
                               .position_constraints[0]
                               .constraint_region.primitive_poses[0]
                               .position.z;
      ik_pose.orientation.x =
          req.motion_plan_request.trajectory_constraints.constraints[tc].orientation_constraints[0].orientation.x;
      ik_pose.orientation.y =
          req.motion_plan_request.trajectory_constraints.constraints[tc].orientation_constraints[0].orientation.y;
      ik_pose.orientation.z =
          req.motion_plan_request.trajectory_constraints.constraints[tc].orientation_constraints[0].orientation.z;
      ik_pose.orientation.w =
          req.motion_plan_request.trajectory_constraints.constraints[tc].orientation_constraints[0].orientation.w;

      robot_state::RobotState robot_state(planning_scene_->getCurrentState());
      robot_state::robotStateMsgToRobotState(req.motion_plan_request.start_state, robot_state);

      // Compute IK
      ROS_INFO_STREAM("Processing trajectory waypoint "
                      << req.motion_plan_request.trajectory_constraints.constraints[tc].name << " ...");
      startTime = ros::WallTime::now();
      success = robot_state.setFromIK(
          robot_state.getJointModelGroup(req.motion_plan_request.group_name), ik_pose,
          req.motion_plan_request.num_planning_attempts, req.motion_plan_request.allowed_planning_time,
          boost::bind(&isIKSolutionCollisionFree, planning_scene_.get(), _1, _2, _3, &reachable));
      double duration = (ros::WallTime::now() - startTime).toSec();

      if (success)
      {
        ROS_INFO("  Success!");
      }
      else if (reachable)
      {
        ROS_INFO("  Reachable, but in collision");
      }
      else
      {
        ROS_INFO("  Not reachable");
      }

      out << reachable << "; " << success << "; " << duration << std::endl;
    }
    out.close();
    ROS_INFO("Results saved to '%s'", filename.c_str());
  }
}

void moveit_benchmarks::BenchmarkExecution::modifyPlannerConfiguration(planning_interface::PlannerManager& planner,
                                                                       const std::string& planner_id,
                                                                       std::size_t param_combinations_id_,
                                                                       RunData& parameter_data)
{
  // Get the planner's current settings
  planning_interface::PlannerConfigurationMap settings = planner.getPlannerConfigurations();

  // Check if this planner_id already has settings (it should)
  planning_interface::PlannerConfigurationMap::iterator settings_it = settings.find(planner_id);
  if (settings_it != settings.end())
  {
    // key exists, loop through all values in this param instance
    std::string str_parameter_value;
    for (std::size_t i = 0; i < param_options_.size(); ++i)
    {
      // convert from double to string
      try
      {
        double value = param_combinations_[param_combinations_id_][param_options_[i].key];
        str_parameter_value = boost::lexical_cast<std::string>(value);
      }
      catch (boost::bad_lexical_cast& ex)
      {
        ROS_WARN("%s", ex.what());
      }

      // record parameter values for logging
      parameter_data[param_options_[i].log_key] = str_parameter_value;

      // record parameter to planner config
      settings_it->second.config[param_options_[i].key] = str_parameter_value;
    }
  }
  else  // settings for this planner_id does not exist
  {
    ROS_ERROR_STREAM("Settings for " << planner_id << " do not exist. This should not happen.");
  }

  // Apply the new settings
  planner.setPlannerConfigurations(settings);
}

std::size_t moveit_benchmarks::BenchmarkExecution::generateParamCombinations()
{
  if (!param_options_.size())
    return 1;  // by default there are no parameters, so the param loop runs once

  // Create initial param instance of all min values for the parameters
  ParameterInstance param_instance;
  for (std::size_t i = 0; i < param_options_.size(); ++i)
  {
    // start = min value
    param_instance[param_options_[i].key] = param_options_[i].start;
  }

  // call recusive function for every param option available
  int initial_options_id = 0;
  recursiveParamCombinations(initial_options_id, param_instance);

  // DEBUG
  /*
  for (std::size_t i = 0; i < param_combinations_.size(); ++i)
  {
    // Debug map
    for(std::map<std::string,double>::const_iterator it = param_combinations_[i].begin(); it !=
  param_combinations_[i].end(); ++it)
      std::cout << "  - " << it->first << " => " << it->second << std::endl;
  }
  */

  // Total number of parameters
  return param_combinations_.size();
}

void moveit_benchmarks::BenchmarkExecution::recursiveParamCombinations(int options_id, ParameterInstance param_instance)
{
  // Get a pointer to current parameter
  const ParameterOptions& param_option = param_options_[options_id];

  do
  {
    // Call the next parameter if one exists
    if (param_options_.size() > options_id + 1)
    {
      recursiveParamCombinations(options_id + 1, param_instance);
    }
    else  // we are the end of the recursive call, so we can add this param_instance to the vector
    {
      param_combinations_.push_back(param_instance);
    }

    // Increment this value
    param_instance[param_option.key] += param_option.step_size;

    // Continue adding iteration amount until value equals end
  } while (param_instance[param_option.key] <= param_option.end + 0.00001);  // rounding issues fudge parameter

  return;
}

void moveit_benchmarks::BenchmarkExecution::printConfigurationSettings(
    const planning_interface::PlannerConfigurationMap& settings, std::ostream& out)
{
  // Debug map
  for (planning_interface::PlannerConfigurationMap::const_iterator it = settings.begin(); it != settings.end(); ++it)
  {
    out << "  - " << it->first << " => " << it->second.name << "/" << it->second.group << std::endl;
    // Debug map
    for (std::map<std::string, std::string>::const_iterator config_it = it->second.config.begin();
         config_it != it->second.config.end(); ++config_it)
      out << "      - " << config_it->first << " => " << config_it->second << std::endl;
  }
}