#include <autotuned_index.h>

Inheritance diagram for rtflann::AutotunedIndex< Distance >:

Classes
struct	CostData

Public Types
typedef NNIndex< Distance >	BaseClass

typedef Distance::ResultType	DistanceType

typedef Distance::ElementType	ElementType

typedef AutotunedIndex< Distance >	IndexType

typedef bool	needs_kdtree_distance

Public Types inherited from rtflann::NNIndex< Distance >
typedef Distance::ResultType	DistanceType

typedef Distance::ElementType	ElementType

Public Member Functions
void	addPoints (const Matrix< ElementType > &points, float rebuild_threshold=2)
	Incrementally add points to the index. More...

	AutotunedIndex (const Matrix< ElementType > &inputData, const IndexParams &params=AutotunedIndexParams(), Distance d=Distance())

	AutotunedIndex (const IndexParams &params=AutotunedIndexParams(), Distance d=Distance())

	AutotunedIndex (const AutotunedIndex &other)

void	buildIndex ()

void	buildIndex (const Matrix< ElementType > &dataset)

BaseClass *	clone () const

void	findNeighbors (ResultSet< DistanceType > &result, const ElementType *vec, const SearchParams &searchParams) const

IndexParams	getParameters () const

FLANN_DEPRECATED SearchParams	getSearchParameters () const

FLANN_DEPRECATED float	getSpeedup () const

flann_algorithm_t	getType () const

int	knnSearch (const Matrix< ElementType > &queries, Matrix< size_t > &indices, Matrix< DistanceType > &dists, size_t knn, const SearchParams &params) const
	Perform k-nearest neighbor search. More...

int	knnSearch (const Matrix< ElementType > &queries, std::vector< std::vector< size_t > > &indices, std::vector< std::vector< DistanceType > > &dists, size_t knn, const SearchParams &params) const
	Perform k-nearest neighbor search. More...

void	loadIndex (FILE *stream)

AutotunedIndex &	operator= (AutotunedIndex other)

int	radiusSearch (const Matrix< ElementType > &queries, Matrix< size_t > &indices, Matrix< DistanceType > &dists, DistanceType radius, const SearchParams &params) const

int	radiusSearch (const Matrix< ElementType > &queries, std::vector< std::vector< size_t > > &indices, std::vector< std::vector< DistanceType > > &dists, DistanceType radius, const SearchParams &params) const

void	removePoint (size_t id)

void	saveIndex (FILE *stream)

template<typename Archive >
void	serialize (Archive &ar)

size_t	size () const

int	usedMemory () const

size_t	veclen () const

virtual	~AutotunedIndex ()

Public Member Functions inherited from rtflann::NNIndex< Distance >
IndexParams	getParameters () const

virtual ElementType *	getPoint (size_t id)

int	knnSearch (const Matrix< ElementType > &queries, std::vector< std::vector< int > > &indices, std::vector< std::vector< DistanceType > > &dists, size_t knn, const SearchParams &params) const

	NNIndex (Distance d)

	NNIndex (const IndexParams &params, Distance d)

	NNIndex (const NNIndex &other)

virtual int	radiusSearch (const Matrix< ElementType > &queries, Matrix< size_t > &indices, Matrix< DistanceType > &dists, float radius, const SearchParams &params) const
	Perform radius search. More...

int	radiusSearch (const Matrix< ElementType > &queries, Matrix< int > &indices, Matrix< DistanceType > &dists, float radius, const SearchParams &params) const

virtual int	radiusSearch (const Matrix< ElementType > &queries, std::vector< std::vector< size_t > > &indices, std::vector< std::vector< DistanceType > > &dists, float radius, const SearchParams &params) const
	Perform radius search. More...

int	radiusSearch (const Matrix< ElementType > &queries, std::vector< std::vector< int > > &indices, std::vector< std::vector< DistanceType > > &dists, float radius, const SearchParams &params) const

size_t	removedCount () const

template<typename Archive >
void	serialize (Archive &ar)

size_t	size () const

size_t	sizeAtBuild () const

size_t	veclen () const

virtual	~NNIndex ()

Public Member Functions inherited from rtflann::IndexBase
virtual	~IndexBase ()

Protected Member Functions
void	buildIndexImpl ()

void	freeIndex ()

Protected Member Functions inherited from rtflann::NNIndex< Distance >
void	cleanRemovedPoints ()

void	extendDataset (const Matrix< ElementType > &new_points)

size_t	id_to_index (size_t id)

void	indices_to_ids (const size_t in, size_t out, size_t size) const

void	setDataset (const Matrix< ElementType > &dataset)

void	swap (NNIndex &other)

Private Member Functions
IndexParams	estimateBuildParams ()

float	estimateSearchParams (SearchParams &searchParams)

void	evaluate_kdtree (CostData &cost)

void	evaluate_kmeans (CostData &cost)

void	optimizeKDTree (std::vector< CostData > &costs)

void	optimizeKMeans (std::vector< CostData > &costs)

void	swap (AutotunedIndex &other)

Private Attributes
NNIndex< Distance > *	bestIndex_

IndexParams	bestParams_

SearchParams	bestSearchParams_

float	build_weight_

Matrix< ElementType >	dataset_

Matrix< size_t >	gt_matches_

float	memory_weight_

float	sample_fraction_

Matrix< ElementType >	sampledDataset_

float	speedup_

float	target_precision_

Matrix< ElementType >	testDataset_

Additional Inherited Members
Protected Attributes inherited from rtflann::NNIndex< Distance >
ElementType *	data_ptr_

Distance	distance_

std::vector< size_t >	ids_

IndexParams	index_params_

size_t	last_id_

std::vector< ElementType * >	points_

bool	removed_

size_t	removed_count_

DynamicBitset	removed_points_

size_t	size_

size_t	size_at_build_

size_t	veclen_

Detailed Description

template<typename Distance>
class rtflann::AutotunedIndex< Distance >

Definition at line 73 of file autotuned_index.h.

Member Typedef Documentation

template<typename Distance >

typedef NNIndex<Distance> rtflann::AutotunedIndex< Distance >::BaseClass

Definition at line 79 of file autotuned_index.h.

template<typename Distance >

typedef Distance::ResultType rtflann::AutotunedIndex< Distance >::DistanceType

Definition at line 77 of file autotuned_index.h.

template<typename Distance >

typedef Distance::ElementType rtflann::AutotunedIndex< Distance >::ElementType

Definition at line 76 of file autotuned_index.h.

template<typename Distance >

typedef AutotunedIndex<Distance> rtflann::AutotunedIndex< Distance >::IndexType

Definition at line 81 of file autotuned_index.h.

template<typename Distance >

typedef bool rtflann::AutotunedIndex< Distance >::needs_kdtree_distance

Definition at line 83 of file autotuned_index.h.

Constructor & Destructor Documentation

template<typename Distance >

rtflann::AutotunedIndex< Distance >::AutotunedIndex	(	const Matrix< ElementType > &	inputData,
		const IndexParams &	params = `AutotunedIndexParams()`,
		Distance	d = `Distance()`
	)

inline

Definition at line 85 of file autotuned_index.h.

template<typename Distance >

rtflann::AutotunedIndex< Distance >::AutotunedIndex	(	const IndexParams &	params = `AutotunedIndexParams()`,
		Distance	d = `Distance()`
	)

inline

Definition at line 94 of file autotuned_index.h.

template<typename Distance >

rtflann::AutotunedIndex< Distance >::AutotunedIndex ( const AutotunedIndex< Distance > & other )

inline

Definition at line 103 of file autotuned_index.h.

template<typename Distance >

virtual rtflann::AutotunedIndex< Distance >::~AutotunedIndex ( )

inlinevirtual

Definition at line 122 of file autotuned_index.h.

Member Function Documentation

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::addPoints	(	const Matrix< ElementType > &	points,
		float	rebuild_threshold = `2`
	)

inlinevirtual

Incrementally add points to the index.

Parameters

points	Matrix with points to be added
rebuild_threshold

Reimplemented from rtflann::NNIndex< Distance >.

Definition at line 164 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::buildIndex ( )

inlinevirtual

Method responsible with building the index.

Reimplemented from rtflann::NNIndex< Distance >.

Definition at line 135 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::buildIndex ( const Matrix< ElementType > & dataset )

inlinevirtual

Builds the index using the specified dataset

Parameters

dataset the dataset to use

Reimplemented from rtflann::NNIndex< Distance >.

Definition at line 157 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::buildIndexImpl ( )

inlineprotectedvirtual

Implements rtflann::NNIndex< Distance >.

Definition at line 349 of file autotuned_index.h.

template<typename Distance >

BaseClass* rtflann::AutotunedIndex< Distance >::clone ( ) const

inlinevirtual

Implements rtflann::NNIndex< Distance >.

Definition at line 127 of file autotuned_index.h.

template<typename Distance >

IndexParams rtflann::AutotunedIndex< Distance >::estimateBuildParams ( )

inlineprivate

Chooses the best nearest-neighbor algorithm and estimates the optimal parameters to use when building the index (for a given precision). Returns a dictionary with the optimal parameters.

Definition at line 560 of file autotuned_index.h.

template<typename Distance >

float rtflann::AutotunedIndex< Distance >::estimateSearchParams ( SearchParams & searchParams )

inlineprivate

Estimates the search time parameters needed to get the desired precision. Precondition: the index is built Postcondition: the searchParams will have the optimum params set, also the speedup obtained over linear search.

Definition at line 647 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::evaluate_kdtree ( CostData & cost )

inlineprivate

Definition at line 397 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::evaluate_kmeans ( CostData & cost )

inlineprivate

Definition at line 370 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::findNeighbors	(	ResultSet< DistanceType > &	result,
		const ElementType *	vec,
		const SearchParams &	searchParams
	)		const

inlinevirtual

Method that searches for nearest-neighbors

Implements rtflann::NNIndex< Distance >.

Definition at line 294 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::freeIndex ( )

inlineprotectedvirtual

Implements rtflann::NNIndex< Distance >.

Definition at line 354 of file autotuned_index.h.

template<typename Distance >

IndexParams rtflann::AutotunedIndex< Distance >::getParameters ( ) const

inlinevirtual

Implements rtflann::IndexBase.

Definition at line 300 of file autotuned_index.h.

template<typename Distance >

FLANN_DEPRECATED SearchParams rtflann::AutotunedIndex< Distance >::getSearchParameters ( ) const

inline

Definition at line 305 of file autotuned_index.h.

template<typename Distance >

FLANN_DEPRECATED float rtflann::AutotunedIndex< Distance >::getSpeedup ( ) const

inline

Definition at line 310 of file autotuned_index.h.

template<typename Distance >

flann_algorithm_t rtflann::AutotunedIndex< Distance >::getType ( ) const

inlinevirtual

Algorithm name

Implements rtflann::IndexBase.

Definition at line 343 of file autotuned_index.h.

template<typename Distance >

int rtflann::AutotunedIndex< Distance >::knnSearch	(	const Matrix< ElementType > &	queries,
		Matrix< size_t > &	indices,
		Matrix< DistanceType > &	dists,
		size_t	knn,
		const SearchParams &	params
	)		const

inlinevirtual

Perform k-nearest neighbor search.

Parameters

[in]	queries	The query points for which to find the nearest neighbors
[out]	indices	The indices of the nearest neighbors found
[out]	dists	Distances to the nearest neighbors found
[in]	knn	Number of nearest neighbors to return
[in]	params	Search parameters

Reimplemented from rtflann::NNIndex< Distance >.

Definition at line 232 of file autotuned_index.h.

template<typename Distance >

int rtflann::AutotunedIndex< Distance >::knnSearch	(	const Matrix< ElementType > &	queries,
		std::vector< std::vector< size_t > > &	indices,
		std::vector< std::vector< DistanceType > > &	dists,
		size_t	knn,
		const SearchParams &	params
	)		const

inlinevirtual

Perform k-nearest neighbor search.

Parameters

queries
indices
dists
knn
params

Returns

Parameters

[in]	queries	The query points for which to find the nearest neighbors
[out]	indices	The indices of the nearest neighbors found
[out]	dists	Distances to the nearest neighbors found
[in]	knn	Number of nearest neighbors to return
[in]	params	Search parameters

Reimplemented from rtflann::NNIndex< Distance >.

Definition at line 246 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::loadIndex ( FILE * stream )

inlinevirtual

Implements rtflann::IndexBase.

Definition at line 219 of file autotuned_index.h.

template<typename Distance >

AutotunedIndex& rtflann::AutotunedIndex< Distance >::operator= ( AutotunedIndex< Distance > other )

inline

Definition at line 116 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::optimizeKDTree ( std::vector< CostData > & costs )

inlineprivate

Definition at line 518 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::optimizeKMeans ( std::vector< CostData > & costs )

inlineprivate

Definition at line 470 of file autotuned_index.h.

template<typename Distance >

int rtflann::AutotunedIndex< Distance >::radiusSearch	(	const Matrix< ElementType > &	queries,
		Matrix< size_t > &	indices,
		Matrix< DistanceType > &	dists,
		DistanceType	radius,
		const SearchParams &	params
	)		const

inline

Definition at line 261 of file autotuned_index.h.

template<typename Distance >

int rtflann::AutotunedIndex< Distance >::radiusSearch	(	const Matrix< ElementType > &	queries,
		std::vector< std::vector< size_t > > &	indices,
		std::vector< std::vector< DistanceType > > &	dists,
		DistanceType	radius,
		const SearchParams &	params
	)		const

inline

Definition at line 275 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::removePoint ( size_t id )

inlinevirtual

Remove point from the index

Parameters

index Index of point to be removed

Reimplemented from rtflann::NNIndex< Distance >.

Definition at line 171 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::saveIndex ( FILE * stream )

inlinevirtual

Implements rtflann::IndexBase.

Definition at line 209 of file autotuned_index.h.

template<typename Distance >

template<typename Archive >

void rtflann::AutotunedIndex< Distance >::serialize ( Archive & ar )

inline

Definition at line 180 of file autotuned_index.h.

template<typename Distance >

size_t rtflann::AutotunedIndex< Distance >::size ( ) const

inlinevirtual

Number of features in this index.

Implements rtflann::IndexBase.

Definition at line 319 of file autotuned_index.h.

template<typename Distance >

void rtflann::AutotunedIndex< Distance >::swap ( AutotunedIndex< Distance > & other )

inlineprivate

Definition at line 720 of file autotuned_index.h.

template<typename Distance >

int rtflann::AutotunedIndex< Distance >::usedMemory ( ) const

inlinevirtual

The amount of memory (in bytes) this index uses.

Implements rtflann::IndexBase.

Definition at line 335 of file autotuned_index.h.

template<typename Distance >

size_t rtflann::AutotunedIndex< Distance >::veclen ( ) const

inlinevirtual

The length of each vector in this index.

Implements rtflann::IndexBase.

Definition at line 327 of file autotuned_index.h.

Member Data Documentation

template<typename Distance >

NNIndex<Distance>* rtflann::AutotunedIndex< Distance >::bestIndex_

private

Definition at line 735 of file autotuned_index.h.

template<typename Distance >

IndexParams rtflann::AutotunedIndex< Distance >::bestParams_

private

Definition at line 737 of file autotuned_index.h.

template<typename Distance >

SearchParams rtflann::AutotunedIndex< Distance >::bestSearchParams_

private

Definition at line 738 of file autotuned_index.h.

template<typename Distance >

float rtflann::AutotunedIndex< Distance >::build_weight_

private

Definition at line 755 of file autotuned_index.h.

template<typename Distance >

Matrix<ElementType> rtflann::AutotunedIndex< Distance >::dataset_

private

The dataset used by this index

Definition at line 749 of file autotuned_index.h.

template<typename Distance >

Matrix<size_t> rtflann::AutotunedIndex< Distance >::gt_matches_

private

Definition at line 742 of file autotuned_index.h.

template<typename Distance >

float rtflann::AutotunedIndex< Distance >::memory_weight_

private

Definition at line 756 of file autotuned_index.h.

template<typename Distance >

float rtflann::AutotunedIndex< Distance >::sample_fraction_

private

Definition at line 757 of file autotuned_index.h.

template<typename Distance >

Matrix<ElementType> rtflann::AutotunedIndex< Distance >::sampledDataset_

private

Definition at line 740 of file autotuned_index.h.

template<typename Distance >

float rtflann::AutotunedIndex< Distance >::speedup_

private

Definition at line 744 of file autotuned_index.h.

template<typename Distance >

float rtflann::AutotunedIndex< Distance >::target_precision_

private

Index parameters

Definition at line 754 of file autotuned_index.h.

template<typename Distance >

Matrix<ElementType> rtflann::AutotunedIndex< Distance >::testDataset_

private

Definition at line 741 of file autotuned_index.h.

The documentation for this class was generated from the following file:

autotuned_index.h

Classes

Public Types

Public Member Functions

Protected Member Functions

Private Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

template<typename Distance> class rtflann::AutotunedIndex< Distance >

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<typename Distance>
class rtflann::AutotunedIndex< Distance >