test_flann_search.cpp

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#include <iostream>
#include <gtest/gtest.h>
#include <pcl/common/time.h>
#include <pcl/search/pcl_search.h>
#include <pcl/search/flann_search.h>
#include <pcl/search/impl/flann_search.hpp>
#include <pcl/point_cloud.h>
#include <pcl/point_types.h>

using namespace std;
using namespace pcl;

PointCloud<PointXYZ> cloud, cloud_big;

void
init ()
{
  float resolution = 0.1;
  for (float z = -0.5f; z <= 0.5f; z += resolution)
    for (float y = -0.5f; y <= 0.5f; y += resolution)
      for (float x = -0.5f; x <= 0.5f; x += resolution)
        cloud.points.push_back (PointXYZ (x, y, z));
  cloud.width = cloud.points.size ();
  cloud.height = 1;

  cloud_big.width = 640;
  cloud_big.height = 480;
  srand (time (NULL));
  // Randomly create a new point cloud
  for (size_t i = 0; i < cloud_big.width * cloud_big.height; ++i)
    cloud_big.points.push_back (
                                PointXYZ (1024 * rand () / (RAND_MAX + 1.0), 1024 * rand () / (RAND_MAX + 1.0),
                                          1024 * rand () / (RAND_MAX + 1.0)));
};


/* Test for FlannSearch nearestKSearch */TEST (PCL, FlannSearch_nearestKSearch)
{
  pcl::search::Search<PointXYZ>* FlannSearch = new pcl::search::FlannSearch<PointXYZ> (new search::FlannSearch<PointXYZ>::KdTreeIndexCreator);
  FlannSearch->setInputCloud (cloud.makeShared ());
  PointXYZ test_point (0.01f, 0.01f, 0.01f);
  unsigned int no_of_neighbors = 20;
  multimap<float, int> sorted_brute_force_result;
  for (size_t i = 0; i < cloud.points.size (); ++i)
  {
    float distance = euclideanDistance (cloud.points[i], test_point);
    sorted_brute_force_result.insert (make_pair (distance, (int)i));
  }
  float max_dist = 0.0f;
  unsigned int counter = 0;
  for (multimap<float, int>::iterator it = sorted_brute_force_result.begin (); it != sorted_brute_force_result.end ()
      && counter < no_of_neighbors; ++it)
  {
    max_dist = max (max_dist, it->first);
    ++counter;
  }

  vector<int> k_indices;
  k_indices.resize (no_of_neighbors);
  vector<float> k_distances;
  k_distances.resize (no_of_neighbors);

  FlannSearch->nearestKSearch (test_point, no_of_neighbors, k_indices, k_distances);

  //if (k_indices.size () != no_of_neighbors)  cerr << "Found "<<k_indices.size ()<<" instead of "<<no_of_neighbors<<" neighbors.\n";
  EXPECT_EQ (k_indices.size (), no_of_neighbors);

  // Check if all found neighbors have distance smaller than max_dist
  for (size_t i = 0; i < k_indices.size (); ++i)
  {
    const PointXYZ& point = cloud.points[k_indices[i]];
    bool ok = euclideanDistance (test_point, point) <= max_dist;
    if (!ok)
    ok = (fabs (euclideanDistance (test_point, point)) - max_dist) <= 1e-6;
    //if (!ok)  cerr << k_indices[i] << " is not correct...\n";
    //else      cerr << k_indices[i] << " is correct...\n";
    EXPECT_EQ (ok, true);
  }

  ScopeTime scopeTime ("FLANN nearestKSearch");
  {
    pcl::search::Search<PointXYZ>* FlannSearch = new pcl::search::FlannSearch<PointXYZ>( new search::FlannSearch<PointXYZ>::KdTreeIndexCreator);
    //FlannSearch->initSearchDS ();
    FlannSearch->setInputCloud (cloud_big.makeShared ());
    for (size_t i = 0; i < cloud_big.points.size (); ++i)
      FlannSearch->nearestKSearch (cloud_big.points[i], no_of_neighbors, k_indices, k_distances);
  }
}

/* Test the templated NN search (for different query point types) */
TEST (PCL, FlannSearch_differentPointT)
{

  unsigned int no_of_neighbors = 20;

  pcl::search::Search<PointXYZ>* FlannSearch = new pcl::search::FlannSearch<PointXYZ> (new search::FlannSearch<PointXYZ>::KdTreeIndexCreator);
  //FlannSearch->initSearchDS ();
  FlannSearch->setInputCloud (cloud_big.makeShared ());

  PointCloud<PointXYZRGB> cloud_rgb;

  copyPointCloud (cloud_big, cloud_rgb);



  std::vector< std::vector< float > > dists;
  std::vector< std::vector< int > > indices;
  FlannSearch->nearestKSearchT (cloud_rgb, std::vector<int> (),no_of_neighbors,indices,dists);

  vector<int> k_indices;
  k_indices.resize (no_of_neighbors);
  vector<float> k_distances;
  k_distances.resize (no_of_neighbors);

  vector<int> k_indices_t;
  k_indices_t.resize (no_of_neighbors);
  vector<float> k_distances_t;
  k_distances_t.resize (no_of_neighbors);

  for (size_t i = 0; i < cloud_rgb.points.size (); ++i)
  {
    FlannSearch->nearestKSearchT (cloud_rgb.points[i], no_of_neighbors, k_indices_t, k_distances_t);
    FlannSearch->nearestKSearch (cloud_big.points[i], no_of_neighbors, k_indices, k_distances);
    EXPECT_EQ (k_indices.size (), indices[i].size ());
    EXPECT_EQ (k_distances.size (), dists[i].size ());
    for (size_t j = 0; j< no_of_neighbors; j++)
    {
      EXPECT_TRUE (k_indices[j] == indices[i][j] || k_distances[j] == dists[i][j]);
      EXPECT_TRUE (k_indices[j] == k_indices_t[j]);
      EXPECT_TRUE (k_distances[j] == k_distances_t[j]);
    }

  }
}

/* Test for FlannSearch nearestKSearch with multiple query points */
TEST (PCL, FlannSearch_multipointKnnSearch)
{

  unsigned int no_of_neighbors = 20;


  pcl::search::Search<PointXYZ>* FlannSearch = new pcl::search::FlannSearch<PointXYZ> (new search::FlannSearch<PointXYZ>::KdTreeIndexCreator);
  //FlannSearch->initSearchDS ();
  FlannSearch->setInputCloud (cloud_big.makeShared ());

  std::vector< std::vector< float > > dists;
  std::vector< std::vector< int > > indices;
  FlannSearch->nearestKSearch (cloud_big, std::vector<int>(),no_of_neighbors,indices,dists);

  vector<int> k_indices;
  k_indices.resize (no_of_neighbors);
  vector<float> k_distances;
  k_distances.resize (no_of_neighbors);

  for (size_t i = 0; i < cloud_big.points.size (); ++i)
  {
    FlannSearch->nearestKSearch (cloud_big.points[i], no_of_neighbors, k_indices, k_distances);
    EXPECT_EQ (k_indices.size (), indices[i].size ());
    EXPECT_EQ (k_distances.size (), dists[i].size ());
    for (size_t j = 0; j< no_of_neighbors; j++ )
    {
      EXPECT_TRUE (k_indices[j] == indices[i][j] || k_distances[j] == dists[i][j]);
    }

  }
}

/* Test for FlannSearch nearestKSearch with multiple query points */
TEST (PCL, FlannSearch_knnByIndex)
{

  unsigned int no_of_neighbors = 3;


  pcl::search::Search<PointXYZ>* flann_search = new pcl::search::FlannSearch<PointXYZ> (new search::FlannSearch<PointXYZ>::KdTreeIndexCreator);
  //FlannSearch->initSearchDS ();
  flann_search->setInputCloud (cloud_big.makeShared ());

  std::vector< std::vector< float > > dists;
  std::vector< std::vector< int > > indices;
  std::vector< int > query_indices;
  for (size_t i = 0; i<cloud_big.size (); i+=2)
  {
    query_indices.push_back (i);
  }
  flann_search->nearestKSearch (cloud_big, query_indices,no_of_neighbors,indices,dists);

  vector<int> k_indices;
  k_indices.resize (no_of_neighbors);
  vector<float> k_distances;
  k_distances.resize (no_of_neighbors);

  for (size_t i = 0; i < query_indices.size (); ++i)
  {
    flann_search->nearestKSearch (cloud_big[2*i], no_of_neighbors, k_indices, k_distances);
    EXPECT_EQ (k_indices.size (), indices[i].size ());
    EXPECT_EQ (k_distances.size (), dists[i].size ());
    for (size_t j = 0; j< no_of_neighbors; j++)
    {
      EXPECT_TRUE (k_indices[j] == indices[i][j] || k_distances[j] == dists[i][j]);
    }
    flann_search->nearestKSearch (cloud_big,query_indices[i], no_of_neighbors, k_indices, k_distances);
    EXPECT_EQ (k_indices.size (), indices[i].size ());
    EXPECT_EQ (k_distances.size (), dists[i].size ());
    for (size_t j = 0; j< no_of_neighbors; j++)
    {
      EXPECT_TRUE (k_indices[j] == indices[i][j] || k_distances[j] == dists[i][j]);
    }

  }
}


/* Test for FlannSearch nearestKSearch */TEST (PCL, FlannSearch_compareToKdTreeFlann)
{

  int no_of_neighbors=3;
  vector<int> k_indices;
  k_indices.resize (no_of_neighbors);
  vector<float> k_distances;
  k_distances.resize (no_of_neighbors);

  pcl::search::Search<PointXYZ> *flann_search, *kdtree_search;

  PointCloud<PointXYZ>::Ptr pc = cloud_big.makeShared();
  {
    ScopeTime scopeTime ("FLANN build");
    flann_search = new pcl::search::FlannSearch<PointXYZ> (new search::FlannSearch<PointXYZ>::KdTreeIndexCreator);
    flann_search->setInputCloud (pc);
  }

  {
    ScopeTime scopeTime ("kdtree build");
    kdtree_search = new pcl::search::KdTree<PointXYZ> ();
    kdtree_search->setInputCloud (pc);
  }



  {
    ScopeTime scopeTime ("FLANN nearestKSearch");
    for (size_t i = 0; i < cloud_big.points.size (); ++i)
      flann_search->nearestKSearch (cloud_big.points[i], no_of_neighbors, k_indices, k_distances);
  }
  {
    ScopeTime scopeTime ("kd tree  nearestKSearch");
    for (size_t i = 0; i < cloud_big.points.size (); ++i)
      kdtree_search->nearestKSearch (cloud_big.points[i], no_of_neighbors, k_indices, k_distances);
  }

  vector<vector<int> > indices_flann;
  vector<vector<float> > dists_flann;
  vector<vector<int> > indices_tree;
  vector<vector<float> > dists_tree;
  indices_flann.resize (cloud_big.size ());
  dists_flann.resize (cloud_big.size ());
  indices_tree.resize (cloud_big.size ());
  dists_tree.resize (cloud_big.size ());
  for (size_t i = 0; i<cloud_big.size (); ++i)
  {
    indices_flann[i].resize (no_of_neighbors);
    dists_flann[i].resize (no_of_neighbors);
    indices_tree[i].resize (no_of_neighbors);
    dists_tree[i].resize (no_of_neighbors);
  }

  {
    ScopeTime scopeTime ("FLANN multi nearestKSearch");
    flann_search->nearestKSearch (cloud_big, std::vector<int> (), no_of_neighbors, indices_flann,dists_flann);
  }
  {
    ScopeTime scopeTime ("kd tree multi nearestKSearch");
    kdtree_search->nearestKSearch (cloud_big, std::vector<int> (), no_of_neighbors, indices_tree,dists_tree);
  }

  ASSERT_EQ (indices_flann.size (), dists_flann.size ());
  ASSERT_EQ (indices_flann.size (), indices_tree.size ());
  ASSERT_EQ (indices_flann.size (), dists_tree.size ());

  for (size_t i = 0; i<indices_flann.size ();i++)
  {
    ASSERT_EQ (indices_flann[i].size (), no_of_neighbors);
    ASSERT_EQ (indices_tree[i].size (), no_of_neighbors);
    ASSERT_EQ (dists_flann[i].size (), no_of_neighbors);
    ASSERT_EQ (dists_tree[i].size (), no_of_neighbors);
    for (int j = 0; j<no_of_neighbors; j++)
    {

      ASSERT_TRUE( indices_flann[i][j] == indices_tree[i][j] || dists_flann[i][j]==dists_tree[i][j]);
    }
  }


  vector<int> query_indices;
  for (size_t i = 0; i<cloud_big.size (); i+=2)
    query_indices.push_back (i);

  {
    ScopeTime scopeTime ("FLANN multi nearestKSearch with indices");
    flann_search->nearestKSearch (cloud_big, query_indices, no_of_neighbors, indices_flann,dists_flann);
  }
  {
    ScopeTime scopeTime ("kd tree multi nearestKSearch with indices");
    kdtree_search->nearestKSearch (cloud_big, query_indices, no_of_neighbors, indices_tree,dists_tree);
  }
  ASSERT_EQ (indices_flann.size (), dists_flann.size ());
  ASSERT_EQ (indices_flann.size (), indices_tree.size ());
  ASSERT_EQ (indices_flann.size (), dists_tree.size ());

  for (size_t i = 0; i<indices_flann.size ();i++)
  {
    ASSERT_EQ (indices_flann[i].size (), no_of_neighbors);
    ASSERT_EQ (indices_tree[i].size (), no_of_neighbors);
    ASSERT_EQ (dists_flann[i].size (), no_of_neighbors);
    ASSERT_EQ (dists_tree[i].size (), no_of_neighbors);
    for (size_t j = 0; j<no_of_neighbors; j++ )
    {

      ASSERT_TRUE( indices_flann[i][j] == indices_tree[i][j] || dists_flann[i][j]==dists_tree[i][j]);
    }
  }

  delete flann_search;
  delete kdtree_search;
}

int
main (int argc, char** argv)
{
  testing::InitGoogleTest (&argc, argv);
  init ();

  // Testing using explicit instantiation of inherited class
  pcl::search::Search<PointXYZ>* FlannSearch = new pcl::search::FlannSearch<PointXYZ> ( new search::FlannSearch<PointXYZ>::KdTreeIndexCreator);
  FlannSearch->setInputCloud (cloud.makeShared ());

  pthread_key_t t;
  pthread_key_create(&t,0);

  return (RUN_ALL_TESTS ());
}
;