Bibliography.cpp
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3 /*
4 
5 Copyright (c) 2010--2012,
6 François Pomerleau and Stephane Magnenat, ASL, ETHZ, Switzerland
7 You can contact the authors at <f dot pomerleau at gmail dot com> and
8 <stephane at magnenat dot net>
9 
10 All rights reserved.
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34 */
35 
36 #include "Bibliography.h"
37 
38 #include <boost/typeof/typeof.hpp>
39 #include <boost/lexical_cast.hpp>
40 #define BOOST_ASSIGN_MAX_PARAMS 6
41 #include <iostream>
42 #include <cassert>
43 #include <stdexcept>
44 
45 namespace PointMatcherSupport
46 {
47  using namespace std;
48 
49  template<typename M>
50  bool contains(const M& m, const typename M::key_type& k)
51  {
52  BOOST_AUTO(it,m.find(k));
53  return (it!=m.end());
54  }
55 
56  template<typename M>
57  const typename M::mapped_type& get(const M& m, const typename M::key_type& k)
58  {
59  BOOST_AUTO(it,m.find(k));
60  if (it!=m.end())
61  return it->second;
62  else
63  throw std::runtime_error("unknown key");
64  }
65 
66  static Bibliography bibliography()
67  {
68  return {
69  {"Phillips2007VarTrimmed", {
70  {"type", "inproceedings"},
71  {"title", "Outlier robust ICP for minimizing fractional RMSD"},
72  {"author", "Phillips, J.M. and Liu, R. and Tomasi, C."},
73  {"booktitle", "3-D Digital Imaging and Modeling, 2007. 3DIM '07. Sixth International Conference on"},
74  {"year", "2007"},
75  {"pages", "427--434"},
76  {"publisher", "IEEE Press"},
77  {"doi", "10.1109/3DIM.2007.39"},
78  {"fulltext", "http://x86.cs.duke.edu/~tomasi/papers/phillips/phillips3DIM07.pdf"}
79  }},
80  {"Chetverikov2002Trimmed", {
81  {"type", "inproceedings"},
82  {"title", "The Trimmed Iterative Closest Point Algorithm"},
83  {"author", "Chetverikov, D. and Svirko, D. and Stepanov, D. and Krsek, P."},
84  {"booktitle", "Pattern Recognition, 2002. Proceedings. 16th International Conference on"},
85  {"year", "2002"},
86  {"pages", "545--548"},
87  {"publisher", "IEEE Press"},
88  {"doi", "10.1109/ICPR.2002.1047997 "},
89  {"fulltext", "http://hci.iwr.uni-heidelberg.de/publications/dip/2002/ICPR2002/DATA/10_1_03.PDF"}
90  }},
91  {"Besl1992Point2Point", {
92  {"type", "inproceedings"},
93  {"title", "A Method for Registration of 3-D Shapes"},
94  {"author", "Besl, P.J. and McKay, H.D."},
95  {"booktitle", "Pattern Analysis and Machine Intelligence, IEEE Transactions"},
96  {"year", "1992"},
97  {"pages", "239--256"},
98  {"publisher", "IEEE Press"},
99  {"doi", "10.1109/34.121791"},
100  {"fulltext", "http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=121791"}
101  }},
102  {"Censi2007ICPCovariance", {
103  {"type", "inproceedings" },
104  {"title", "An Accurate Closed-Form Estimate of {ICP}'s Covariance" },
105  {"author", "Censi, A." },
106  {"booktitle", "Proceedings of the {IEEE} International Conference on Robotics and Automation ({ICRA})" },
107  {"year", "2007" },
108  {"pages", "3167--3172" },
109  {"publisher", "IEEE Press" },
110  {"doi", "10.1109/ROBOT.2007.363961" },
111  {"fulltext", "http://purl.org/censi/research/2007-icra-icpcov.pdf"}
112  }},
113  {"Chen1991Point2Plane", {
114  {"type", "inproceedings"},
115  {"title", "Object modeling by registration of multiple range images"},
116  {"author", "Chen, Y. and Medioni, G."},
117  {"booktitle", "Robotics and Automation, 1991. Proceedings., 1991 IEEE International Conference on"},
118  {"year", "1991"},
119  {"pages", "2724--2729"},
120  {"publisher", "IEEE Press"},
121  {"doi", "10.1109/ROBOT.1991.132043"},
122  {"fulltext", "http://ieeexplore.ieee.org/search/srchabstract.jsp?tp=&arnumber=132043"}
123  }},
124  {"Prakhya2015Point2Plane", {
125  {"type", "inproceedings"},
126  {"title", "A closed-form estimate of 3D ICP covariance"},
127  {"author", "Prakhya, S.M. and Bingbing, L. and Rui, Y. and Lin, W."},
128  {"booktitle", "2015 14th IAPR International Conference on Machine Vision Applications (MVA)"},
129  {"year", "2015"},
130  {"pages", "526--529"},
131  {"publisher", "IEEE Press"},
132  {"doi", "10.1109/MVA.2015.7153246"},
133  {"fulltext", "https://ieeexplore.ieee.org/search/srchabstract.jsp?tp=&arnumber=7153246"}
134  }},
135  {"Masuda1996Random", {
136  {"type", "inproceedings"},
137  {"title", "Registration and integration of multiple range images for 3-D model construction"},
138  {"author", "Masuda, T. and Sakaue, K. and Yokoya, N."},
139  {"booktitle", "Pattern Recognition, 1996., Proceedings of the 13th International Conference on"},
140  {"year", "1996"},
141  {"pages", "879--883"},
142  {"publisher", "IEEE Press"},
143  {"doi", "10.1109/ICPR.1996.546150"},
144  {"fulltext", "http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=546150"}
145  }},
146  {"Diebel2004Median", {
147  {"type", "inproceedings"},
148  {"title", "Simultaneous Localization and Mapping with Active Stereo Vision"},
149  {"author", "Diebel, J. and Reutersward, K. and Thrun, S. and Davis, J. and Gupta, R."},
150  {"booktitle", "Intelligent Robots and Systems, 2004. (IROS 2004). Proceedings. 2004 IEEE/RSJ International Conference on"},
151  {"year", "2004"},
152  {"pages", "3436--3443"},
153  {"publisher", "IEEE Press"},
154  {"doi", "10.1109/IROS.2004.1389948"},
155  {"fulltext", "http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=1389948"}
156  }},
157  {"Pomerleau2012Noise", {
158  {"type", "inproceedings"},
159  {"title", "Noise Characterization of Depth Sensors for Surface Inspections"},
160  {"author", "F. Pomerleau, A. Breitenmoser, M. Liu, F. Colas, R. Siegwart"},
161  {"booktitle", " International Conference on Applied Robotics for the Power Industry, 2012. (CARPI 2012). Proceedings of the IEEE"},
162  {"year", "2012"},
163  {"pages", "1--8"},
164  {"publisher", "IEEE Press"},
165  {"doi", ""},
166  {"fulltext", ""}
167  }},
168  {"RobustWeightFunctions", {
169  {"type", "article"},
170  {"title", "Robust regression using iteratively reweighted least-squares"},
171  {"author", "Paul W Holland and Roy E Welsch"},
172  {"booktitle", "Communications in Statistics - Theory and Methods"},
173  {"year", "1977"},
174  {"pages", "813-827"},
175  {"publisher", ""},
176  {"doi", "10.1080/03610927708827533"},
177  {"fulltext", ""}
178  }},
179  {"Umeyama1991", {
180  {"type", "article"},
181  {"author", "Umeyama, Shinji"},
182  {"title", "Least-Squares Estimation of Transformation Parameters Between Two Point Patterns"},
183  {"journal", "IEEE Trans. Pattern Anal. Mach. Intell."},
184  {"issue_date", "April 1991"},
185  {"volume", "13"},
186  {"number", "4"},
187  {"month", "apr"},
188  {"year", "1991"},
189  {"issn", "0162-8828"},
190  {"pages", "376--380"},
191  {"numpages", "5"},
192  {"url", "https://doi.org/10.1109/34.88573"},
193  {"doi", "10.1109/34.88573"},
194  {"acmid", "105525"},
195  {"publisher", "IEEE Computer Society"},
196  {"address", "Washington, DC, USA"}
197  }},
198  {"Rusinkiewicz2001", {
199  {"type", "inproceedings"},
200  {"author", "Rusinkiewicz, Szymon and Levoy, Marc"},
201  {"title", "Efficient Variants of the ICP Algorithm"},
202  {"journal", "Proceedings Third International Conference on 3-D Digital Imaging and Modeling"},
203  {"year", "2001"},
204  {"isbn", "0769509843"},
205  {"pages", "145--152"},
206  {"doi", "10.1109/IM.2001.924423"},
207  {"publisher", "IEEE Computer Society"},
208  {"address", "Quebec City, Quebec, Canada"}
209  }},
210  {"Gelfand2003", {
211  {"type", "inproceedings"},
212  {"author", "Gelfand, N. and Ikemoto, L. and Rusinkiewicz, Szymon and Levoy, M."},
213  {"title", "Geometrically stable sampling for the ICP algorithm"},
214  {"journal", "Fourth International Conference on 3-D Digital Imaging and Modeling, 2003. 3DIM 2003. Proceedings."},
215  {"year", "2003"},
216  {"isbn", "0-7695-1991-1"},
217  {"pages", "260--267"},
218  {"doi", "10.1109/IM.2003.1240258"},
219  {"publisher", "IEEE Computer Society"}
220  }},
221  {"Labussiere2020", {
222  {"type", "article"},
223  {"author", "Labussière, Mathieu and Laconte, Johann and Pomerleau, François"},
224  {"title", "Geometry Preserving Sampling Method Based on Spectral Decomposition for Large-Scale Environments"},
225  {"journal", "Frontiers in Robotics and AI"},
226  {"month", "sep"},
227  {"year", "2020"},
228  {"volume", "7"},
229  {"isbn", "2296-9144"},
230  {"pages", "134--148"},
231  {"doi", "10.3389/frobt.2020.572054"},
232  {"fulltext", "https://www.frontiersin.org/article/10.3389/frobt.2020.572054"}
233  }}
234  };
235  }
236 
237  CurrentBibliography::CurrentBibliography(Mode mode):
238  mode(mode)
239  {}
240 
241  void CurrentBibliography::dump(std::ostream& os) const
242  {
243  switch (mode)
244  {
245  case NORMAL: dumpText(os); break;
246  case ROSWIKI: dumpWiki(os); break;
247  case BIBTEX: dumpBibtex(os); break;
248  default: assert(false); break;
249  };
250  }
251 
252  void CurrentBibliography::dumpText(std::ostream& os) const
253  {
254  Bibliography biblio(bibliography());
255  for (size_t i = 0; i < entries.size(); ++i)
256  {
257  const string& entryName(entries[i]);
258  if (!contains(biblio, entryName))
259  throw runtime_error(string("Broken bibliography, missing entry " + entryName));
260  const StringMap& entry(get(biblio, entryName));
261 
262  os << "[" << i+1 << "]";
263  if (contains(entry, "title"))
264  os << " " << get(entry, "title") << ".";
265  if (contains(entry, "author"))
266  os << " " << get(entry, "author") << "";
267  if (contains(entry, "booktitle"))
268  os << " In " << get(entry, "booktitle") << ".";
269  if (contains(entry, "journal"))
270  os << " " << get(entry, "journal") << ".";
271  if (contains(entry, "pages"))
272  os << " " << get(entry, "pages") << ".";
273  if (contains(entry, "year"))
274  os << " " << get(entry, "year") << ".";
275  os << endl << endl;
276  }
277  }
278 
279  void CurrentBibliography::dumpWiki(std::ostream& os) const
280  {
281  Bibliography biblio(bibliography());
282  for (size_t i = 0; i < entries.size(); ++i)
283  {
284  const string& entryName(entries[i]);
285  if (!contains(biblio, entryName))
286  throw runtime_error(string("Broken bibliography, missing entry " + entryName));
287  const StringMap& entry(get(biblio, entryName));
288 
289  os << " * " << "<<Anchor(" << entryName << ")>>[" << i+1 << "] -";
290  if (contains(entry, "title"))
291  os << " '''" << get(entry, "title") << ".'''";
292  if (contains(entry, "author"))
293  os << " " << get(entry, "author") << "";
294  if (contains(entry, "booktitle"))
295  os << " ''In " << get(entry, "booktitle") << ".''";
296  if (contains(entry, "journal"))
297  os << " " << get(entry, "journal") << ".";
298  if (contains(entry, "pages"))
299  os << " " << get(entry, "pages") << ".";
300  if (contains(entry, "year"))
301  os << " " << get(entry, "year") << ".";
302  if (contains(entry, "doi"))
303  os << " DOI: [[https://doi.org/" << get(entry, "doi") << "|" << get(entry, "doi") << "]].";
304  if (contains(entry, "fulltext"))
305  os << " [[" << get(entry, "fulltext") << "|full text]].";
306  os << endl;
307  }
308  }
309 
310  void CurrentBibliography::dumpBibtex(std::ostream& os) const
311  {
312  Bibliography biblio(bibliography());
313  for (size_t i = 0; i < entries.size(); ++i)
314  {
315  const string& entryName(entries[i]);
316  if (!contains(biblio, entryName))
317  throw runtime_error(string("Broken bibliography, missing entry " + entryName));
318  const StringMap& entry(get(biblio, entryName));
319 
320  os << "@" << get(entry, "type") << "{" << entryName << endl;
321  if (contains(entry, "title"))
322  os << "\ttitle={" << get(entry, "title") << "}," << endl;
323  if (contains(entry, "author"))
324  os << "\tauthor={" << get(entry, "author") << "}," << endl;
325  if (contains(entry, "booktitle"))
326  os << "\tbooktitle={" << get(entry, "booktitle") << "}," << endl;
327  if (contains(entry, "journal"))
328  os << "\tjournal={" << get(entry, "journal") << "}," << endl;
329  if (contains(entry, "pages"))
330  os << "\tpages={" << get(entry, "pages") << "}," << endl;
331  if (contains(entry, "year"))
332  os << "\tyear={" << get(entry, "year") << "}," << endl;
333  os << "}" << endl << endl;
334  }
335  }
336 
337  static StringVector splitString(const string& text, char delim)
338  {
339  StringVector res;
340  size_t pos = 0;
341  while(true)
342  {
343  const size_t nextPos = text.find(delim, pos);
344  if (nextPos == text.npos)
345  {
346  res.push_back(text.substr(pos));
347  break;
348  }
349  else
350  res.push_back(text.substr(pos, nextPos - pos));
351  pos = nextPos + 1;
352  }
353  return res;
354  }
355 
356  std::string getAndReplaceBibEntries(const std::string& text, CurrentBibliography& curBib)
357  {
358  CurrentBibliography::Mode mode(curBib.mode);
359  BibIndices& indices(curBib.indices);
360  StringVector& entries(curBib.entries);
361 
362  string newText;
363  const StringVector words(splitString(text, ' '));
364  for (size_t i = 0; i < words.size(); ++i)
365  {
366  const string& word(words[i]);
367  const size_t l(word.length());
368  const size_t p(word.find('}'));
369  if ((l > 7) && (word.substr(0, 6) == "\\cite{") && (p != string::npos))
370  {
371  if (mode == CurrentBibliography::ROSWIKI)
372  newText += "&#91;";
373  else
374  newText += '[';
375  const StringVector keys(splitString(word.substr(6, p-6), ','));
376  for (size_t j = 0; j < keys.size(); ++j)
377  {
378  const string key(keys[j]);
379  if (mode == CurrentBibliography::ROSWIKI)
380  newText += "[[#" + key + "|";
381  if (contains(indices, key))
382  {
383  newText += std::to_string(get(indices, key)+1);
384  }
385  else
386  {
387  size_t index(entries.size());
388  entries.push_back(key);
389  indices[key] = index;
390  newText += std::to_string(index+1);
391  }
392  if (mode == CurrentBibliography::ROSWIKI)
393  newText += "]]";
394  if (j+1 != keys.size())
395  newText += ',';
396  }
397  if (mode == CurrentBibliography::ROSWIKI)
398  newText += "&#93;";
399  else
400  newText += ']';
401  newText += word.substr(p+1);
402  }
403  else
404  newText += word;
405  if (i+1 != words.size())
406  newText += ' ';
407  }
408  if (mode == CurrentBibliography::BIBTEX)
409  return text;
410  else
411  return newText;
412  }
413 }; // PointMatcherSupport
PointMatcherSupport::CurrentBibliography::Mode
Mode
Definition: Bibliography.h:53
PointMatcherSupport::CurrentBibliography::entries
StringVector entries
Definition: Bibliography.h:60
PointMatcherSupport::BibIndices
std::map< std::string, unsigned > BibIndices
Definition: Bibliography.h:49
res
res
PointMatcherSupport::getAndReplaceBibEntries
std::string getAndReplaceBibEntries(const std::string &, CurrentBibliography &curBib)
PointMatcherSupport::CurrentBibliography::CurrentBibliography
CurrentBibliography(Mode mode=NORMAL)
Definition: Bibliography.cpp:237
PointMatcherSupport::CurrentBibliography::dumpBibtex
void dumpBibtex(std::ostream &os) const
PointMatcherSupport::Bibliography
StringMapMap Bibliography
Definition: Bibliography.h:48
testing::internal::string
::std::string string
Definition: gtest.h:1979
PointMatcherSupport::StringVector
std::vector< std::string > StringVector
Definition: Bibliography.h:45
PointMatcherSupport::StringMap
std::map< std::string, std::string > StringMap
Definition: Bibliography.h:46
PointMatcherSupport::contains
bool contains(const M &m, const typename M::key_type &k)
Definition: Bibliography.cpp:50
PointMatcherSupport::CurrentBibliography::dumpText
void dumpText(std::ostream &os) const
Definition: Bibliography.cpp:252
PointMatcherSupport::CurrentBibliography::ROSWIKI
@ ROSWIKI
Definition: Bibliography.h:56
PointMatcherSupport::bibliography
static Bibliography bibliography()
Definition: Bibliography.cpp:66
PointMatcherSupport::CurrentBibliography::dump
void dump(std::ostream &os) const
Definition: Bibliography.cpp:241
PointMatcherSupport::CurrentBibliography::NORMAL
@ NORMAL
Definition: Bibliography.h:55
std
PointMatcherSupport::get
const M::mapped_type & get(const M &m, const typename M::key_type &k)
Definition: Bibliography.cpp:57
PointMatcherSupport::CurrentBibliography::BIBTEX
@ BIBTEX
Definition: Bibliography.h:57
PointMatcherSupport
Functions and classes that are not dependant on scalar type are defined in this namespace.
Definition: Bibliography.cpp:45
PointMatcherSupport::CurrentBibliography::indices
BibIndices indices
Definition: Bibliography.h:59
Bibliography.h
PointMatcherSupport::CurrentBibliography::mode
enum PointMatcherSupport::CurrentBibliography::Mode mode
PointMatcherSupport::CurrentBibliography::dumpWiki
void dumpWiki(std::ostream &os) const
Definition: Bibliography.cpp:279
PointMatcherSupport::CurrentBibliography
Definition: Bibliography.h:51

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