#include <ublas_interface.hh>

Public Types
typedef boost::numeric::ublas::matrix< real, boost::numeric::ublas::column_major >	gene_matrix

typedef boost::numeric::ublas::vector< real >	gene_vector

typedef real	real_type

typedef std::vector< stl_vector >	stl_matrix

typedef std::vector< real >	stl_vector

Static Public Member Functions
static void	aat_product (gene_matrix &A, gene_matrix &X, int N)

static void	ata_product (gene_matrix &A, gene_matrix &X, int N)

static void	atv_product (gene_matrix &A, gene_vector &B, gene_vector &X, int N)

static void	axpby (real a, const gene_vector &X, real b, gene_vector &Y, int N)

static void	axpy (const real coef, const gene_vector &X, gene_vector &Y, int N)

static void	axpy_slow (const real coef, const gene_vector &X, gene_vector &Y, int N)

static void	copy_matrix (const gene_matrix &source, gene_matrix &cible, int N)

static void	copy_vector (const gene_vector &source, gene_vector &cible, int N)

static void	free_matrix (gene_matrix &A, int N)

static void	free_vector (gene_vector &B)

static void	matrix_from_stl (gene_matrix &A, stl_matrix &A_stl)

static void	matrix_matrix_product (gene_matrix &A, gene_matrix &B, gene_matrix &X, int N)

static void	matrix_matrix_product_slow (gene_matrix &A, gene_matrix &B, gene_matrix &X, int N)

static void	matrix_to_stl (gene_matrix &A, stl_matrix &A_stl)

static void	matrix_vector_product (gene_matrix &A, gene_vector &B, gene_vector &X, int N)

static void	matrix_vector_product_slow (gene_matrix &A, gene_vector &B, gene_vector &X, int N)

static std::string	name (void)

static void	trisolve_lower (const gene_matrix &L, const gene_vector &B, gene_vector &X, int N)

static void	vector_from_stl (gene_vector &B, stl_vector &B_stl)

static void	vector_to_stl (gene_vector &B, stl_vector &B_stl)

Detailed Description

template<class real>
class ublas_interface< real >

Definition at line 31 of file ublas_interface.hh.

Member Typedef Documentation

◆ gene_matrix

template<class real >

typedef boost::numeric::ublas::matrix<real,boost::numeric::ublas::column_major> ublas_interface< real >::gene_matrix

Definition at line 40 of file ublas_interface.hh.

◆ gene_vector

template<class real >

typedef boost::numeric::ublas::vector<real> ublas_interface< real >::gene_vector

Definition at line 41 of file ublas_interface.hh.

◆ real_type

template<class real >

typedef real ublas_interface< real >::real_type

Definition at line 35 of file ublas_interface.hh.

◆ stl_matrix

template<class real >

typedef std::vector<stl_vector> ublas_interface< real >::stl_matrix

Definition at line 38 of file ublas_interface.hh.

◆ stl_vector

template<class real >

typedef std::vector<real> ublas_interface< real >::stl_vector

Definition at line 37 of file ublas_interface.hh.

Member Function Documentation

◆ aat_product()

template<class real >

static void ublas_interface< real >::aat_product	(	gene_matrix &	A,
		gene_matrix &	X,
		int	N
	)

inlinestatic

Definition at line 130 of file ublas_interface.hh.

◆ ata_product()

template<class real >

static void ublas_interface< real >::ata_product	(	gene_matrix &	A,
		gene_matrix &	X,
		int	N
	)

inlinestatic

Definition at line 125 of file ublas_interface.hh.

◆ atv_product()

template<class real >

static void ublas_interface< real >::atv_product	(	gene_matrix &	A,
		gene_vector &	B,
		gene_vector &	X,
		int	N
	)

inlinestatic

Definition at line 109 of file ublas_interface.hh.

◆ axpby()

template<class real >

static void ublas_interface< real >::axpby	(	real	a,
		const gene_vector &	X,
		real	b,
		gene_vector &	Y,
		int	N
	)

inlinestatic

Definition at line 121 of file ublas_interface.hh.

◆ axpy()

template<class real >

static void ublas_interface< real >::axpy	(	const real	coef,
		const gene_vector &	X,
		gene_vector &	Y,
		int	N
	)

inlinestatic

Definition at line 117 of file ublas_interface.hh.

◆ axpy_slow()

template<class real >

static void ublas_interface< real >::axpy_slow	(	const real	coef,
		const gene_vector &	X,
		gene_vector &	Y,
		int	N
	)

inlinestatic

Definition at line 99 of file ublas_interface.hh.

◆ copy_matrix()

template<class real >

static void ublas_interface< real >::copy_matrix	(	const gene_matrix &	source,
		gene_matrix &	cible,
		int	N
	)

inlinestatic

Definition at line 83 of file ublas_interface.hh.

◆ copy_vector()

template<class real >

static void ublas_interface< real >::copy_vector	(	const gene_vector &	source,
		gene_vector &	cible,
		int	N
	)

inlinestatic

Definition at line 77 of file ublas_interface.hh.

◆ free_matrix()

template<class real >

static void ublas_interface< real >::free_matrix	(	gene_matrix &	A,
		int	N
	)

inlinestatic

Definition at line 45 of file ublas_interface.hh.

◆ free_vector()

template<class real >

static void ublas_interface< real >::free_vector ( gene_vector & B )

inlinestatic

Definition at line 47 of file ublas_interface.hh.

◆ matrix_from_stl()

template<class real >

static void ublas_interface< real >::matrix_from_stl	(	gene_matrix &	A,
		stl_matrix &	A_stl
	)

inlinestatic

Definition at line 49 of file ublas_interface.hh.

◆ matrix_matrix_product()

template<class real >

static void ublas_interface< real >::matrix_matrix_product	(	gene_matrix &	A,
		gene_matrix &	B,
		gene_matrix &	X,
		int	N
	)

inlinestatic

Definition at line 113 of file ublas_interface.hh.

◆ matrix_matrix_product_slow()

template<class real >

static void ublas_interface< real >::matrix_matrix_product_slow	(	gene_matrix &	A,
		gene_matrix &	B,
		gene_matrix &	X,
		int	N
	)

inlinestatic

Definition at line 95 of file ublas_interface.hh.

◆ matrix_to_stl()

template<class real >

static void ublas_interface< real >::matrix_to_stl	(	gene_matrix &	A,
		stl_matrix &	A_stl
	)

inlinestatic

Definition at line 67 of file ublas_interface.hh.

◆ matrix_vector_product()

template<class real >

static void ublas_interface< real >::matrix_vector_product	(	gene_matrix &	A,
		gene_vector &	B,
		gene_vector &	X,
		int	N
	)

inlinestatic

Definition at line 105 of file ublas_interface.hh.

◆ matrix_vector_product_slow()

template<class real >

static void ublas_interface< real >::matrix_vector_product_slow	(	gene_matrix &	A,
		gene_vector &	B,
		gene_vector &	X,
		int	N
	)

inlinestatic

Definition at line 91 of file ublas_interface.hh.

◆ name()

template<class real >

static std::string ublas_interface< real >::name ( void )

inlinestatic

Definition at line 43 of file ublas_interface.hh.

◆ trisolve_lower()

template<class real >

static void ublas_interface< real >::trisolve_lower	(	const gene_matrix &	L,
		const gene_vector &	B,
		gene_vector &	X,
		int	N
	)

inlinestatic

Definition at line 135 of file ublas_interface.hh.

◆ vector_from_stl()

template<class real >

static void ublas_interface< real >::vector_from_stl	(	gene_vector &	B,
		stl_vector &	B_stl
	)

inlinestatic

Definition at line 56 of file ublas_interface.hh.

◆ vector_to_stl()

template<class real >

static void ublas_interface< real >::vector_to_stl	(	gene_vector &	B,
		stl_vector &	B_stl
	)

inlinestatic

Definition at line 62 of file ublas_interface.hh.

The documentation for this class was generated from the following file:

ublas_interface.hh

Public Types

Static Public Member Functions

Detailed Description

template<class real> class ublas_interface< real >

Member Typedef Documentation

◆ gene_matrix

◆ gene_vector

◆ real_type

◆ stl_matrix

◆ stl_vector

Member Function Documentation

◆ aat_product()

◆ ata_product()

◆ atv_product()

◆ axpby()

◆ axpy()

◆ axpy_slow()

◆ copy_matrix()

◆ copy_vector()

◆ free_matrix()

◆ free_vector()

◆ matrix_from_stl()

◆ matrix_matrix_product()

◆ matrix_matrix_product_slow()

◆ matrix_to_stl()

◆ matrix_vector_product()

◆ matrix_vector_product_slow()

◆ name()

◆ trisolve_lower()

◆ vector_from_stl()

◆ vector_to_stl()

template<class real>
class ublas_interface< real >